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scnpilot_p_inoc_scaffold_1588_curated_7

Organism: scnpilot_dereplicated_Magnetospirillum_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(6061..10551)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.9
  • Coverage: 999.99
  • Bit_score: 2776
  • Evalue 0.0
DNA-directed RNA polymerase, beta' subunit/160 kD subunit; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 85.7
  • Coverage: 999.99
  • Bit_score: 2544
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U4D2_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 93.9
  • Coverage: 999.99
  • Bit_score: 2776
  • Evalue 0.0

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Taxonomy

Magnetospirillum gryphiswaldense → Magnetospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4491
ATGAATGAATTGATGAAGATCTTCGGTCAGACTGCCGGTACCCAGTCCTTCGACCAGATCCGTATTTCCATCGCCTCCCCCGAGCGTATCCGCTCGTGGTCGTACGGCGAGATCAAGAAGCCGGAAACCATCAACTACCGTACCTTCAAGCCCGAGCGCGACGGCCTGTTCTGCGCCCGCATCTTCGGGCCGATCAAGGATTACGAATGCTTGTGCGGCAAGTACAAGCGCATGAAGTATCGCGGCATCATCTGCGAAAAGTGCGGCGTCGAAGTGACCCTGGCCAAGGTGCGCCGCGAGCGCATGGGCCATATCGAACTGGCCAGCCCGGTCGCCCACATCTGGTTCCTGAAGTCGCTGCCGTCCCGCATCGGCCTGTTGTGCGACATGACGCTCAAGGATCTTGAGCGCATCCTGTATTTCGAAAACTACGTGGTGGTCGAGCCCGGCCTGACCCCCTTGAAGATCCGCGAGTTGCTGTCGGAAGAACAGTACATGCGCGCGGTGGACGAATACGGCGAGGACAGCTTCACCGCCAAGATCGGCGCCGAAGCCATTCGCGACATGCTGTCGGCCATCGATCTGGAGTCCGAAAAGGACAAGCTGAAGATCGAGCTGAAGGAAACCACCTCGGAAGCCAAGCGCAAGAAGCTGGTCAAGCGTCTGAAGCTGGTGGAAGCCTTCCTGGAATCCGATTCGCGTCCCGAATGGATGATCCTGGAAGTCATTCCGGTCATCCCGCCGGAACTGCGTCCGCTGGTGCCGCTGGACGGCGGCCGCTTCGCCACTTCGGATCTGAACGACCTTTACCGTCGTGTGATCAACCGTAACAACCGTCTGAAGCGCCTGATCGAGCTGCGTGCGCCCGAAATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGAAGCCGTCGACGCCCTGTTCGACAACGGCCGCCGCGGCCGCGCCATCACGGGGGCCAACAAGCGTCCGCTGAAGTCGCTCAGCGACATGCTGAAGGGCAAGCAGGGCCGCTTCCGTCAGAACCTGCTGGGCAAGCGCGTCGACTATTCCGGCCGTTCGGTCATCGTGGTGGGTCCAGAACTGAAGCTGCACCAGTGCGGCCTGCCCAAGAAGATGGCGCTCGAGCTGTTCAAGCCCTTCGTCTATTCCAAGCTGGAACTCTATGGCATGGCCACCACCATCAAGGCGGCCAAGCGCATGGTGGAAAAGGAACGTCCCGAGGTTTGGGACATCCTGGAAGAAGTCATCCGAGAGCATCCGGTGATGCTGAACCGCGCCCCCACTCTGCACCGTCTGGGCATCCAGGCTTTCGAACCGGTGCTGATCGAGGGCAAGGCCATTCAGCTGCATCCGCTGGTCTGCACCGCCTTCAACGCCGACTTCGACGGCGACCAGATGGCCGTGCACGTGCCGCTTTCGCTGGAAGCCCAGCTGGAAGCCCGCGTGCTGATGATGTCCACCAACAACATCCTGTCGCCCGCCAACGGCAAGCCGATCATCGTGCCGTCCCAGGATATCGTGCTGGGTATCTATTACATCACCATGGAACGGGACGAGCAGCCCGGTCTGGCGCTGAAGATCACCACCGCCGAGGAACTGCGCGTTGGTCTGGCCACCGGCACCCTGTTCTTCTTCAACCGCACCAATCCCAATGTTGCGGTTGACACCTCGGACCTGGAAGCCCTGGTGGCGAAGATCGCCCGGCGCGAAATCACCGCCCACCGCGCCTTGAAGGTGACCAGCCGCGACATGCTGGAAGCCGGCCTGTCCCGTGGCGACATCGGTGTGTTCAACGCCGAGAAGCCCGGCACCGCTTATGTGGTGAAGGACGCCGACACGGTGGAAAAGGACGTGAAGGCCGGCAAGGCCATCTTGTTCCGCATCCCGGTGTTCCGCGACATGAAGGAAATCGACGCCGCCCTGGCCGACAAGGTGCTGACCCTGCACCAGCGCATCCGGGCGCGTTACAACAACGTCGACAAGGATTGCAACCCGATCGTCGAGATCGTCTCGACCACCGCCGGTCGCATGATGCTGTCGGAAATCCTGCCGCGTAACCCCAATGTGCCGTTCGCCTCGATCAATCGTCTGCTGACCAAGAAGGACATCCAGAACGTCATCGATCTGGTCTACCGTCACTGCGGTCAGAAAGAGACGGTGATCTTCGCCGACCGCGTCATGGGCCTGGGTTACTCCAACGCCTTCAAGGCCGGTATCTCGTTCGGCAAGGACGACATGGTGATCCCGCCGGCCAAGGACGTTCTGGTTTCCGAAACCGAGGCCAAGGCCAAGGAATACGAACAGCAGTACCAGGACGGTCTGATCACCCAGGGCGAAAAGTACAACAAGGTGGTTGACGCCTGGTCCAAGTGCACCGACGACGTCGCCGACGCCATGATGAAGGAAATCAGCCGCGTCGAGCCTGGCCGCATGGTCAACTCGGTGTACATGATGGCCCATTCGGGCGCTCGTGGTTCGGCCGCCCAGATGAAGCAGTTGGCCGGCATGCGCGGTCTGATGGCCAAGCCCTCGGGCGAAATCATCGAGACCCCGATCATCTCGAACTTCAAGGAAGGCCTGACCGTGCTGGAGTACTTCAACTCCACCCACGGCGCCCGTAAGGGTCTGGCCGACACCGCCTTGAAGACCGCCAACTCGGGTTACCTGACCCGTCGTCTGGTGGACGTGGCCCAGGACGCCATCATCGTCGAGGAAGATTGCGGCACCATCAACGGCCTGACCGTCTCGGCGGTGGTCGAAGGTGGTGAAGTGATCAGCCCGCTGGCCGAACGTATCCTGGGCCGCTCGGCGTCCCGCGACATCGTGAACCCGGCCACCGGCGAAATCATCGTCGCTTCCGGCGAACTGATCGACGAATCGGCGGTCGAGTTGATCGACGACGCCGGCATCGAAGTGGTGAACATCCGCTCGGTGCTGACCTGTGAAGCCAAGGAAGGCGTCTGCGGCTGCTGCTATGGCCGCGATCTGGCCCGCGGCACCAAGGTCAACGTCGGTGAAGCGGTCGGCGTCATCGCCGCCCAGTCCATCGGTGAACCCGGTACCCAGCTGACCATGCGTACCTTCCACATCGGTGGTGCGGCGCAGCGTGGTGCCGAACAGTCCAGCATCGAAGCCACCGGCGACACCACGGTTCAGTTGCTGAACAAGAACGTGGTCACCAACTCGTCGGGTGCCAAGATCGTCATGAGCCGCAACTGCGAATTGCTGTTGCTGGATGCCGGCGGCCGCGAACGTGCCCGTCACCGCGTCCCCTATGGCGCCAAGCTGCTGGTGGAAGAGGCCCAGAAGGTCACCAAGGGCACCAAGATGGCCGAATGGGACCCCTACACCCTGCCGATCATCACCGAAACCAACGGTGTCGCCCACTACGTCGACCTGGTCGAAGGCCTGTCGGTCCGCGAAGTGGTCGACGAAGCCACTGGCATCGCCAGCAAGGTGGTGGTCGACTGGAAGCAGCAGCCGCGTGGCTCGGACCTGCGTCCGCGCATCGAATTGCGTGACGACAAGGGCCAGCCGGTGACCCTGCCCAACGGCATGGAAGCCCGCTATTTCCTGTCGGTGGACGCCATCCTGTCGGTGGAAAACCAGGCCAAGCTGCATGCCGGCGACGTCCTGGCCCGTATCCCGCGTGAAGGTTCGAAGACCCGTGACATCACCGGCGGTCTGCCGCGTGTGGCCGAGTTGTTCGAAGCCAGGAAGCCCAAGGATCACGCCATCATCTCCGACATCGAAGGCCGCGTGGAATTCGGCAAGGACTACAAGTCCAAGCGCCGCATCCTGGTGGTCCCCGAGGACGGCGATCCGATGGAATACCTGATCCCCAAGGGCAAGCACGTTTCGGTGCAGGAAGGCGACTATGTCCGTCGCGGCGACAGCCTGATGGACGGCAACCCGGTGCCCCACGACATCCTGCGCGTCATGGGTGTCGAGGCCCTGGCCCAGTACCTGATCAACGAAATCCAAGAGGTCTATCGTCTGCAGGGCGTGAAGATCAACGACAAGCACATCGAGGTGATCGTTCGCCAGATGCTGCAAAAGGTCGAGATCAACGATCCGGGCGACACCACCTTCCTGGTCGGCGAACAGGTTGACCGTCAGGAATTCGAGCACGAGAACCGCAAGGCGATCAAGGAACAGGGCCGCCCGGCCGGTGGCACTCCGGTGCTGCAGGGCATCACCAAGGCGTCCTTGCAGACCCATTCCTTCATCTCGGCCGCTTCGTTCCAGGAAACCACCCGCGTGCTGACGGAAGCCGCCGTCTCGGGCAAGGTGGACACCCTGAACGGCCTGAAGGAAAACGTCATCGTCGGTCGTCTGATCCCCGCCGGTACCGGCGCGGTGATGAACCGCCTGCGCGAGCTGGCCGCCAAGCGCGACCGCGAGATGCAGGTGGAAGGCGAGGTCGAGGGCGAAAGCCCGGCCCTGCCCGCCAGCGGCGAGGAAAGCCCGGCCGCTCCGGCCGAGTGA
PROTEIN sequence
Length: 1497
MNELMKIFGQTAGTQSFDQIRISIASPERIRSWSYGEIKKPETINYRTFKPERDGLFCARIFGPIKDYECLCGKYKRMKYRGIICEKCGVEVTLAKVRRERMGHIELASPVAHIWFLKSLPSRIGLLCDMTLKDLERILYFENYVVVEPGLTPLKIRELLSEEQYMRAVDEYGEDSFTAKIGAEAIRDMLSAIDLESEKDKLKIELKETTSEAKRKKLVKRLKLVEAFLESDSRPEWMILEVIPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPEIIVRNEKRMLQEAVDALFDNGRRGRAITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKLHQCGLPKKMALELFKPFVYSKLELYGMATTIKAAKRMVEKERPEVWDILEEVIREHPVMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQLEARVLMMSTNNILSPANGKPIIVPSQDIVLGIYYITMERDEQPGLALKITTAEELRVGLATGTLFFFNRTNPNVAVDTSDLEALVAKIARREITAHRALKVTSRDMLEAGLSRGDIGVFNAEKPGTAYVVKDADTVEKDVKAGKAILFRIPVFRDMKEIDAALADKVLTLHQRIRARYNNVDKDCNPIVEIVSTTAGRMMLSEILPRNPNVPFASINRLLTKKDIQNVIDLVYRHCGQKETVIFADRVMGLGYSNAFKAGISFGKDDMVIPPAKDVLVSETEAKAKEYEQQYQDGLITQGEKYNKVVDAWSKCTDDVADAMMKEISRVEPGRMVNSVYMMAHSGARGSAAQMKQLAGMRGLMAKPSGEIIETPIISNFKEGLTVLEYFNSTHGARKGLADTALKTANSGYLTRRLVDVAQDAIIVEEDCGTINGLTVSAVVEGGEVISPLAERILGRSASRDIVNPATGEIIVASGELIDESAVELIDDAGIEVVNIRSVLTCEAKEGVCGCCYGRDLARGTKVNVGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQRGAEQSSIEATGDTTVQLLNKNVVTNSSGAKIVMSRNCELLLLDAGGRERARHRVPYGAKLLVEEAQKVTKGTKMAEWDPYTLPIITETNGVAHYVDLVEGLSVREVVDEATGIASKVVVDWKQQPRGSDLRPRIELRDDKGQPVTLPNGMEARYFLSVDAILSVENQAKLHAGDVLARIPREGSKTRDITGGLPRVAELFEARKPKDHAIISDIEGRVEFGKDYKSKRRILVVPEDGDPMEYLIPKGKHVSVQEGDYVRRGDSLMDGNPVPHDILRVMGVEALAQYLINEIQEVYRLQGVKINDKHIEVIVRQMLQKVEINDPGDTTFLVGEQVDRQEFEHENRKAIKEQGRPAGGTPVLQGITKASLQTHSFISAASFQETTRVLTEAAVSGKVDTLNGLKENVIVGRLIPAGTGAVMNRLRELAAKRDREMQVEGEVEGESPALPASGEESPAAPAE*