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scnpilot_p_inoc_scaffold_1588_curated_8

Organism: scnpilot_dereplicated_Magnetospirillum_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(10615..14796)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.8
  • Coverage: 999.99
  • Bit_score: 2616
  • Evalue 0.0
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 88.6
  • Coverage: 999.99
  • Bit_score: 2448
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U4D1_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 94.8
  • Coverage: 999.99
  • Bit_score: 2616
  • Evalue 0.0

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Taxonomy

Magnetospirillum gryphiswaldense → Magnetospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4182
ATGGCTAAATCCTATACGGGTCGGAAGCGTGTTCGCAAAAGCTTCGGGCGCATCCCCACCGTGGCCCCGATGCCCAACCTGATCGAGGTGCAGAAAAGCTCCTATGATCATTTCCTGCAAATGGACACGTTGCCGGAAAAGCGGACCAATGTCGGCCTGCAGGAAGTCTTTAAGTCGGTTTTTCCGATCAAGGATTTCTCTGAGCGCGGCACTCTGGAATTCGTCAAGTACGAGCTGGAACAGCCCAAGTACGACGTCGAGGAATGCCAGCAGCGTGGCATGACCTTCGCCGCCCCCTTGAAGGTGACCCTGCGCCTGGTGGTGTGGGACATCGACGAGGACACCGGCGCGCGGTCCATCCGCGACATCAAGGAGCAGGACGTGTACATGGGCGACATGCCGCTCATGACCGCCAACGGCACCTTCGTCATCAACGGCACCGAACGCGTCATCGTTTCCCAGATGCACCGCAGCCCGGGCGTGTTCTTCGACCACGACAAGGGCAAGACCCATTCGTCGGGCAAGTACCTGTTCGCCGCCCGCGTCATCCCCTATCGCGGTTCCTGGCTGGACTTCGAGTTCGACGCCAAGGATCTGGTCTATGTCCGCATCGACCGTCGCCGCAAGCTGCCGGTGACCACCCTGCTGTACGCGCTGGACAGCGTCGCCACCCAGGCGTTGCGTGCCAGCCGCGCCGCCGAGGGCCGCCCGGTCGACCTGACCGAGCTGAAGGGCATGACCAGCGAGGACATCCTCGACTACTTCTACGACAAGAACGTCTACACCCGCGGCCCCAAGGGCTGGAAGACCGCGTTCCAGCCGGAACGCATGAAGGGTGTGAAGCTGGTCTATGACCTGATCGACGCCAAGACCGGCGAGAAGGTGGCCGAGGCCGGCGCCAAGATGACCCCGCGTCTGGGCAAGAAGCTGAAGGAACAGGGCGTCGAGGACATCCTGGTCCTGCCGGAAGATCTGACCGGTCAGTACGCCGCCGAGGACATCATCAACGAGAAGACCGGCGAGATTTACATCGAAGCCGGTCACGAGTTGACCGCCGCCGTGTTGGCCGAGCTGGAAAAGGCCGGTGTCACCGAGCTGCCGATGCTGGCCATCGACCACATCAATGTCGGTCCCTACATCCGCAACACGCTGTCGGTGGACAAGAACGCCAGCCGCGAAGAAGCGCTGATCGACATCTACCGCGTCATGCGTCCGGGCGAACCGCCGACCCTGGAAACCGCCGAAGCGCTGTTCCAGGGCCTGTTCTTCGATTCCGAACGCTACGACCTGTCGGCGGTCGGCCGCGTCAAGATGAACTCGCGCCTGAACTTCACCGAAAAGGATGTCCCCGACACCGTGCGCGTGCTGCGCAAGGAAGACATCCTGGCCGTCATCAAGATCCTGGTGGAACTGAAGGACGGCAAGGGCGAGATCGACGACATCGACCATCTGGGCAACCGTCGTGTCCGCTCGGTGGGCGAACTGATGGAAAACCAGTATCGCGTCGGCCTCTTGCGCATGGAACGCGCCATCCGCGAACGCATGTCGTCCGTCGATATCGATTCGGTGATGCCGCACGACCTGATCAACGCCAAGCCGGCTGCCGCCGCGGTGCGTGAGTTCTTCGGTTCGTCGCAGCTGTCGCAGTTCATGGACCAGACCAACCCGCTGTCGGAAATCACCCACAAGCGTCGTCTCTCGGCCCTCGGGCCGGGCGGTCTGACCCGCGAGCGCGCCGGCTTCGAAGTCCGCGACGTTCACCCCACCCATTACGGCCGTATCTGCCCGATTGAGACCCCCGAAGGTCCGAACATCGGTCTGATCAACAGCTTGGCCACCTATGCCCGCGTCAACCAGTACGGCTTCATCGAGGCTCCCTATCGTCGCGTCGTCGACGGCAAGGTGACCGACGACGTGCAGTACATGTCGGCGAACGAGGAAGGCCGCTACACCGTCGCCCAGGCCAATTCGGAACTGGACGCCGAAGGCCGCTTCGTCCACGACCTGGTGTCGTGCCGTCAGGCCGGCGAATTCGTCATGGTGCCGCCCAGCGAAATCACCATGATCGACGTGTCGCCCAAGCAGCTGGTGTCGGTCGCCGCGGCGCTGATCCCGTTCTTGGAAAACGACGACGCGAACCGCGCCCTGATGGGTTCGAACATGCAGCGTCAGGCGGTTCCGCTGATCCGCGCCGAGGCGCCCCTGGTGGGCACCGGCATGGAGCAGGCGGTGGCGCGTGACTCGGGCGCGGCGATCACCGCCAAGCGTACCGGCATCGTCGACCAGGTGGACGCCACTCGTATCGTTATCCGCGCCACCGAGGATGTTTCGTCCAACGAATCCGGCGTCGACATCTACAACCTGCTGAAGTTCCAGCGTTCCAACCAGAACACCTGCATCACCCAGAAGCCGCTGGTGACCGTGGGCGACATCATCCGCAAGGGTGACATCATCGCCGACGGCCCCAGCACCCAGCTGGGCGAGCTGGCCCTGGGCCGCAACGTGCTGGTCGCGTTCATGCCCTGGAACGGCTACAACTTCGAAGATTCGATCCTGATTTCGGAACGCATCGTCCGTGACGACGTCTTCACCTCGATCCACATCGAGGAATTCGAAGTCATGGCCCGCGACACCAAGCTGGGCCAGGAAGAAATCACCCGCGACATCCCCAACGTGGGCGAAGAAGCGCTGAAGAACCTGGACGAAGCCGGTATCGTTTATATCGGTGCCGAGGTGAAGCCGGGCGACATCCTGGTCGGCAAGGTGACGCCGAAGGGCGAAAGCCCGATGACCCCGGAAGAAAAGCTGCTGCGCGCCATCTTCGGCGAAAAGGCGTCCGACGTCCGCGACACCAGCTTGCGTCTGCCCCCGGGCGTCGCCGGCACCATCGTGGAGGTGCGTGTCTTCTCGCGTCGTGGCGTGGAAAAGGACGAACGCGCCCTGGCCATCGAACGGTCGGAAATCGAACGTCTGGCCAAGGACCGCGACGACGAACGCGCCATCTTGGAACGCTCCTTCGCCGCCCGTCTGAAGCAGCTGCTGCTGGGTCAGAAGGTGGTGTCCGGTCCCAAGGGCGTGAAGGCCAACGTGCCGCTCACCGAGGACATGCTGGCCGAACTGCACCTGTCGGCCTGGCGCAACATCGCCGTCGAAGACGACGCGGTGATGATGGATGTGGAAAGCCTGAAGCGGGCTTTCGACATGGCCGTCGAGCGTCTGCAGGACCGCTTCGAGAACAAGGTCGAAAAGCTGCAGCGCGGTGACGAGCTGCCGCCCGGCGTGATGAAGATGGTCAAGGTGTTCGTGGCGGTGAAGCGCAAGCTGCAGCCGGGCGACAAGATGGCCGGCCGTCACGGCAACAAGGGTGTCATCTCGCGCATCATGCCGCTGGAAGACATGCCTTACCTGGAAGACGGCCAGCAGGTCGACATCGTGCTGAACCCCCTGGGTGTGCCGTCGCGTATGAACGTCGGTCAGATCCTGGAAACCCATCTGGGTTGGGCCGCCGCCGGCCTGGGTCAGCAGATCGGCCGCGTCCTGGAAAGCGTCAAGCATTCCTCGGGCAGCGTCGCCGACGTGCGGGGCAAGCTGAAGGACATCTATGGTTCCGAGTATTACGACGAGGAAATCAGCGACCTGTCCGACGGCGAAATCCTGGAACTGGCCACCAACCTGAAGCCCGGCACGCCGTTTGCCACCCCGGTTTTCGACGGTGCCCGCGAAAGCGACATCTGCGAAATGCTGGAAAAGGCGGGGCGCGACCGTTCGGGTCAGGTCACCTTGTTCGACGGCCGTACCGGTGATCCCTTCGACCGCAAGGTCACCGTGGGCTACATCTACATGCTGAAGCTGCACCACCTGGTGGACGACAAGATCCACGCCCGTTCCATCGGCCCGTACTCGCTGGTCACCCAGCAGCCGTTGGGCGGTAAGGCGCAGTTCGGCGGCCAGCGCTTCGGTGAAATGGAAGTGTGGGCGCTGGAAGCTTACGGCGCGGCCTATACGTTGCAGGAAATGCTGACGGTGAAGTCGGACGACGTGTCCGGCCGCACCAAGGTCTACGAAGCCATCGTCCGCGGCGACGACAACTTCGAGGCCGGCATCCCCGAATCCTTCAACGTGCTGGTCAAGGAACTGCGCTCGCTCGGCTTGAACGTCGAGCTGACCCAGCGCGATTTCTAA
PROTEIN sequence
Length: 1394
MAKSYTGRKRVRKSFGRIPTVAPMPNLIEVQKSSYDHFLQMDTLPEKRTNVGLQEVFKSVFPIKDFSERGTLEFVKYELEQPKYDVEECQQRGMTFAAPLKVTLRLVVWDIDEDTGARSIRDIKEQDVYMGDMPLMTANGTFVINGTERVIVSQMHRSPGVFFDHDKGKTHSSGKYLFAARVIPYRGSWLDFEFDAKDLVYVRIDRRRKLPVTTLLYALDSVATQALRASRAAEGRPVDLTELKGMTSEDILDYFYDKNVYTRGPKGWKTAFQPERMKGVKLVYDLIDAKTGEKVAEAGAKMTPRLGKKLKEQGVEDILVLPEDLTGQYAAEDIINEKTGEIYIEAGHELTAAVLAELEKAGVTELPMLAIDHINVGPYIRNTLSVDKNASREEALIDIYRVMRPGEPPTLETAEALFQGLFFDSERYDLSAVGRVKMNSRLNFTEKDVPDTVRVLRKEDILAVIKILVELKDGKGEIDDIDHLGNRRVRSVGELMENQYRVGLLRMERAIRERMSSVDIDSVMPHDLINAKPAAAAVREFFGSSQLSQFMDQTNPLSEITHKRRLSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATYARVNQYGFIEAPYRRVVDGKVTDDVQYMSANEEGRYTVAQANSELDAEGRFVHDLVSCRQAGEFVMVPPSEITMIDVSPKQLVSVAAALIPFLENDDANRALMGSNMQRQAVPLIRAEAPLVGTGMEQAVARDSGAAITAKRTGIVDQVDATRIVIRATEDVSSNESGVDIYNLLKFQRSNQNTCITQKPLVTVGDIIRKGDIIADGPSTQLGELALGRNVLVAFMPWNGYNFEDSILISERIVRDDVFTSIHIEEFEVMARDTKLGQEEITRDIPNVGEEALKNLDEAGIVYIGAEVKPGDILVGKVTPKGESPMTPEEKLLRAIFGEKASDVRDTSLRLPPGVAGTIVEVRVFSRRGVEKDERALAIERSEIERLAKDRDDERAILERSFAARLKQLLLGQKVVSGPKGVKANVPLTEDMLAELHLSAWRNIAVEDDAVMMDVESLKRAFDMAVERLQDRFENKVEKLQRGDELPPGVMKMVKVFVAVKRKLQPGDKMAGRHGNKGVISRIMPLEDMPYLEDGQQVDIVLNPLGVPSRMNVGQILETHLGWAAAGLGQQIGRVLESVKHSSGSVADVRGKLKDIYGSEYYDEEISDLSDGEILELATNLKPGTPFATPVFDGARESDICEMLEKAGRDRSGQVTLFDGRTGDPFDRKVTVGYIYMLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVSGRTKVYEAIVRGDDNFEAGIPESFNVLVKELRSLGLNVELTQRDF*