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scnpilot_p_inoc_scaffold_328_curated_25

Organism: scnpilot_dereplicated_Magnetospirillum_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(22138..22692)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor id=2102449 bin=GWB2_Desulfobacterales_56_26 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 41.2
  • Coverage: 177.0
  • Bit_score: 136
  • Evalue 2.70e-29
Uncharacterized protein {ECO:0000313|EMBL:EKD39163.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.9
  • Coverage: 176.0
  • Bit_score: 136
  • Evalue 3.80e-29
RNA polymerase sigma factor SigZ; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 37.1
  • Coverage: 186.0
  • Bit_score: 125
  • Evalue 2.00e-26

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 555
ATGACCACCCTTGGCGACCTGTCCCGATTTTACCACGTTCTGCGGGCGTATGTGGGACGGCGTGTCGCCATGGCCGACGACGCCGACGAGATCGTCCAGACGGTGATGATGCGCCTGCACCTGAACCAGGACCGTTTGCACGACGCCAATGTGACGGCGTGGCTGCTGCGCGTGGCCCGTAACGCCGTCATCGACCATTACCGGTCGCGGGCCGGACGTCCGCCCACCACCGAACTGTCCGACGACCTGGCCCAACCCGTGGCCGACGATGACGACGGCGAACGCCAGCGCATGGCCCAATGCCTTCACCCGCTTCTGCAGGCCCTGCCCCCACATTATGCCCAAGCGGTCGAGATGGCCGATTTTCAGGGATTGCCGCATGCCCGGATGGCGGAAGAACTGGGGATCGGGCTGTCGGCGGTGAAATCACGGGTGCAACGGGGCCGCGCCTTGCTGCGGGCCGAACTGACCCGCTGCTGCAGTATCGAAATCGACCATCTGAGACGGGCAGTGGCGATGACGGCCAAGGAAAAAGACGGCTGCAGCCGATGCTAG
PROTEIN sequence
Length: 185
MTTLGDLSRFYHVLRAYVGRRVAMADDADEIVQTVMMRLHLNQDRLHDANVTAWLLRVARNAVIDHYRSRAGRPPTTELSDDLAQPVADDDDGERQRMAQCLHPLLQALPPHYAQAVEMADFQGLPHARMAEELGIGLSAVKSRVQRGRALLRAELTRCCSIEIDHLRRAVAMTAKEKDGCSRC*