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scnpilot_p_inoc_scaffold_328_curated

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Displaying items 1-30 of 100 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_328_curated_1
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..1325
DNA (1323bp) protein (441aa)
Putative silver efflux pump n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W7X3_MAGSA
putative silver efflux pump
Putative silver efflux pump {ECO:0000313|EMBL:BAE50052.1}; TaxID=342108 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).;"
scnpilot_p_inoc_scaffold_328_curated_2
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1322..2089
DNA (768bp) protein (256aa)
Putative uncharacterized protein n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W7X4_MAGSA
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAE50051.1}; TaxID=342108 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).;"
scnpilot_p_inoc_scaffold_328_curated_3
Caenispirillum salinarum, Caenispirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2101..2541
DNA (441bp) protein (147aa)
Cytochrome c n=1 Tax=Caenispirillum salinarum AK4 RepID=K9GUJ4_9PROT
Cytochrome c {ECO:0000313|EMBL:EKV28877.1}; TaxID=1238182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;" source="Caenispirillum salinarum AK4.;"
putative cytochrome c, class I precursor
scnpilot_p_inoc_scaffold_328_curated_4
unknown

Not on your lists

2667..3221
DNA (555bp) protein (185aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_328_curated_5
Caenispirillum salinarum, Caenispirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3301..4944
DNA (1644bp) protein (548aa)
Uncharacterized protein n=1 Tax=Caenispirillum salinarum AK4 RepID=K9H109_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKV31960.1}; TaxID=1238182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;" source="Caenispirillum salinarum AK4.;"
methyl-accepting chemotaxis protein
scnpilot_p_inoc_scaffold_328_curated_6
Magnetospirillum magnetotacticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4941..6170
DNA (1230bp) protein (410aa)
Two-component system response regulator n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P4D1_AZOS1
Response regulator {ECO:0000313|EMBL:KIL99078.1}; TaxID=272627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magnetotacticum MS-1.;"
rpfG; two-component system response regulator
scnpilot_p_inoc_scaffold_328_curated_7
Magnetospirillum sp. SO-1, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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6291..6614
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Magnetospirillum sp. SO-1 RepID=M3ADI6_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EME70848.1}; TaxID=1244869 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum sp. SO-1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_328_curated_8
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6615..7076
DNA (462bp) protein (154aa)
Cytochrome n=1 Tax=Oceanibaculum indicum P24 RepID=K2J5E8_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KJB91143.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
cytochrome c, class I
scnpilot_p_inoc_scaffold_328_curated_9
unknown

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7262..7708
DNA (447bp) protein (149aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_328_curated_10
RLO_Rhodospirillales_58_28, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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7856..8083
DNA (228bp) protein (76aa)
Uncharacterized protein n=2 Tax=Burkholderiales RepID=E3HKU5_ACHXA
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_58_28_curated
scnpilot_p_inoc_scaffold_328_curated_11
RLO_Rhodospirillales_58_28, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8089..8751
DNA (663bp) protein (221aa)
isoprenylcysteine carboxyl methyltransferase n=1 Tax=Methyloversatilis universalis RepID=UPI00036A38C8
Isoprenylcysteine carboxyl methyltransferase
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_58_28_curated
scnpilot_p_inoc_scaffold_328_curated_12
RLO_Rhodospirillales_58_28, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8769..9644
DNA (876bp) protein (292aa)
Putative uncharacterized protein id=2053780 bin=GWD2_Deltaproteobacteria_55_8 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_58_28_curated
scnpilot_p_inoc_scaffold_328_curated_13
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9659..12019
DNA (2361bp) protein (787aa)
copper-translocating P-type ATPase (EC:3.6.3.4); K01533 Cu2+-exporting ATPase [EC:3.6.3.4]
Copper-transporting P-type ATPase n=1 Tax=Roseomonas sp. B5 RepID=UPI0003002748
Copper-transporting P-type ATPase {ECO:0000313|EMBL:KJB91144.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
scnpilot_p_inoc_scaffold_328_curated_14
unknown

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12378..12566
DNA (189bp) protein (63aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_328_curated_15
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13211..13654)
DNA (444bp) protein (148aa)
Putative uncharacterized protein n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W5F3_MAGSA
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAE50922.1}; TaxID=342108 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).;"
scnpilot_p_inoc_scaffold_328_curated_16
Cupriavidus sp. HMR-1, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13997..14806
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Nevskia ramosa RepID=UPI0003B51E71
Uncharacterized protein {ECO:0000313|EMBL:ELA00835.1}; TaxID=1249621 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HMR-1.;"
scnpilot_p_inoc_scaffold_328_curated_17
Rhizobium sp. Pop5, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15059..15952)
DNA (894bp) protein (298aa)
LysR family transcriptional regulator n=1 Tax=Rhizobium sp. Pop5 RepID=K0VSI3_9RHIZ
LysR family transcriptional regulator {ECO:0000313|EMBL:EJZ21862.1}; TaxID=1223565 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. Pop5.;"
LysR family transcriptional regulator
scnpilot_p_inoc_scaffold_328_curated_18
Serratia plymuthica, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16056..17048
DNA (993bp) protein (331aa)
yccK; putative oxidoreductase YccK (EC:1.-.-.-)
Putative oxidoreductase YccK {ECO:0000313|EMBL:AGO55874.1}; EC=1.-.-.- {ECO:0000313|EMBL:AGO55874.1};; TaxID=682634 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia plymuthica 4Rx13.;"
Putative oxidoreductase YccK n=1 Tax=Serratia plymuthica 4Rx13 RepID=S0AJ13_SERPL
scnpilot_p_inoc_scaffold_328_curated_19
Phaeospirillum molischianum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17075..18124
DNA (1050bp) protein (350aa)
adhP; Zn-dependent alcohol dehydrogenase (EC:1.1.1.1); K13979 uncharacterized zinc-type alcohol dehydrogenase-like protein [EC:1.-.-.-]
Putative oxidoreductase, Zn-dependent and NAD(P)-binding n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FQ13_PHAMO
Putative oxidoreductase, Zn-dependent and NAD(P)-binding {ECO:0000313|EMBL:CCG40451.1}; TaxID=1150626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum molischianum DSM 120.;"
scnpilot_p_inoc_scaffold_328_curated_20
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(18184..18921)
DNA (738bp) protein (246aa)
DedA family protein n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4TZ60_9PROT
DedA family protein {ECO:0000313|EMBL:CAM75917.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
hypothetical protein
scnpilot_p_inoc_scaffold_328_curated_21
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19029..19463)
DNA (435bp) protein (145aa)
CBS domain n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4TZ61_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDK98689.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
CBS domain-containing protein
scnpilot_p_inoc_scaffold_328_curated_22
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19666..20748)
DNA (1083bp) protein (361aa)
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; EC=6.3.4.18 {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; 5-(carboxyamino)imidazole ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magne
phosphoribosylaminoimidazole carboxylase ATPase subunit; K01589 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
Phosphoribosylaminoimidazole carboxylase ATPase subunit (AIR carboxylase) n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TZ62_9PROT
scnpilot_p_inoc_scaffold_328_curated_23
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20756..21271)
DNA (516bp) protein (172aa)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillu
phosphoribosylcarboxyaminoimidazole mutase; K01588 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TZ63_9PROT
scnpilot_p_inoc_scaffold_328_curated_24
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21390..22121
DNA (732bp) protein (244aa)
GGDEF domain n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4TZ64_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDK98686.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
response regulator
scnpilot_p_inoc_scaffold_328_curated_25

Not on your lists

comp(22138..22692)
DNA (555bp) protein (185aa)
RNA polymerase sigma factor id=2102449 bin=GWB2_Desulfobacterales_56_26 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
Uncharacterized protein {ECO:0000313|EMBL:EKD39163.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
RNA polymerase sigma factor SigZ; K03088 RNA polymerase sigma-70 factor, ECF subfamily
scnpilot_p_inoc_scaffold_328_curated_26
Sporomusa ovata, Sporomusa, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

22835..23389
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Sporomusa ovata DSM 2662 RepID=T0ILQ4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQB26761.1}; TaxID=1123288 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Sporomusa.;" source="Sporomusa ovata DSM 2662.;"
scnpilot_p_inoc_scaffold_328_curated_27
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23427..24608)
DNA (1182bp) protein (394aa)
Putative Bicyclomycin resistance protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6EZK6_9PROT
Putative Bicyclomycin resistance protein {ECO:0000313|EMBL:CDK98685.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
putative drug resistance transporter
scnpilot_p_inoc_scaffold_328_curated_28
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24640..24846)
DNA (207bp) protein (69aa)
Protein containing DUF465 n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4TZ66_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDK98684.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
coiled-coil domain-containing protein
scnpilot_p_inoc_scaffold_328_curated_29
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24947..26041
DNA (1095bp) protein (365aa)
6-phosphofructokinase {ECO:0000313|EMBL:CAM75924.1}; EC=2.7.1.11 {ECO:0000313|EMBL:CAM75924.1};; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
6-phosphofructokinase; K00850 6-phosphofructokinase [EC:2.7.1.11]
6-phosphofructokinase n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TZ67_9PROT
scnpilot_p_inoc_scaffold_328_curated_30
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26162..26728)
DNA (567bp) protein (189aa)
Aromatic acid decarboxylase {ECO:0000256|RuleBase:RU362054}; EC=4.1.1.- {ECO:0000256|RuleBase:RU362054};; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
3-polyprenyl-4-hydroxybenzoate decarboxylase; K03186 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiX [EC:4.1.1.-]
3-octaprenyl-4-hydroxybenzoate carboxy-lyase n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6EZU4_9PROT
Displaying items 1-30 of 100 in total

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