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scnpilot_p_inoc_scaffold_445_curated_22

Organism: scnpilot_dereplicated_Magnetospirillum_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(21490..21945)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, XRE family n=2 Tax=mine drainage metagenome RepID=T0YYV8_9ZZZZ similarity UNIREF
DB: UNIREF100
  • Identity: 35.4
  • Coverage: 144.0
  • Bit_score: 84
  • Evalue 7.80e-14
DNA, contig: SP662 {ECO:0000313|EMBL:GAN15638.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 36.8
  • Coverage: 133.0
  • Bit_score: 93
  • Evalue 2.30e-16
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 44.3
  • Coverage: 88.0
  • Bit_score: 68
  • Evalue 1.80e-09

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Taxonomy

Sphingomonas paucimobilis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 456
GTGCGAAATACCAACACCGCAACCGTCAATGATCCTAACCCGGGCATCGCCCGGCGGCTGGTCGCCGTGCGGCAGCACAGTGGTCTCAATCAGTCCGCCTTCGCGGCCCGGCTCGGCTTCGCTCGCCGCACCTATCTGGGATGGGAGCGCGGCGAATCCGATCCCCCGATCTGGTTGCTCGACGCGCTTCACCAGGAGTTCGGCATCGACCCGCACTGGCTGCTGCACGGCCCAGGAGACCGGCCCCGTCAATACGGCGCAGGGCTCGACTGGAGCCGCTTCAGCCGCCTGCTTGTGGCCGTCGATGAGGCTGCGCGAGCGGCAGGTCTGGCGCCCCGGCCCGAACAACTCTGCGAACTGGCCCGCGCGGTCTTCGAGGGCCCTCCTGAAGACGAAGAGGGCGCAATCGAGCGTCTGGCGCTGACCTTCAGCACAATGAAGACGCGGGCGCGCTGA
PROTEIN sequence
Length: 152
VRNTNTATVNDPNPGIARRLVAVRQHSGLNQSAFAARLGFARRTYLGWERGESDPPIWLLDALHQEFGIDPHWLLHGPGDRPRQYGAGLDWSRFSRLLVAVDEAARAAGLAPRPEQLCELARAVFEGPPEDEEGAIERLALTFSTMKTRAR*