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scnpilot_p_inoc_scaffold_445_curated

Search features with annotation key words

Displaying items 1-30 of 89 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_445_curated_1
Brevundimonas nasdae, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..376)
DNA (375bp) protein (125aa)
Antirestriction protein ArdC n=2 Tax=Oligotropha carboxidovorans RepID=B6JAA5_OLICO
Antirepressor {ECO:0000313|EMBL:KIC55738.1}; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas nasdae.;"
antirestriction protein; ArdC
scnpilot_p_inoc_scaffold_445_curated_2
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(536..1957)
DNA (1422bp) protein (474aa)
Transposase IS4 family protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IJS6_XANP2
transposase IS4 family protein
Transposase IS4 family protein {ECO:0000313|EMBL:ABS68269.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
scnpilot_p_inoc_scaffold_445_curated_3
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2101..3444)
DNA (1344bp) protein (448aa)
regulatory protein; K00383 glutathione reductase (NADPH) [EC:1.8.1.7]
Putative regulatory protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RAA2_PHEZH
Putative regulatory protein {ECO:0000313|EMBL:ACG77909.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
scnpilot_p_inoc_scaffold_445_curated_4
Sphingobium herbicidovorans, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3429..4208)
DNA (780bp) protein (260aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00037E6762
Mercuric reductase {ECO:0000313|EMBL:KFG89876.1}; TaxID=1219045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium herbicidovorans (strain ATCC 700291 / DSM 11019 / NBRC; 16415 / MH) (Sphingomonas herbicidovorans).;"
mercuric reductase
scnpilot_p_inoc_scaffold_445_curated_5
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4243..5883)
DNA (1641bp) protein (547aa)
merA; mercuric reductase (EC:1.16.1.1); K00520 mercuric reductase [EC:1.16.1.1]
Mercuric reductase {ECO:0000256|RuleBase:RU361223}; EC=1.16.1.1 {ECO:0000256|RuleBase:RU361223};; Hg(II) reductase {ECO:0000256|RuleBase:RU361223}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
PREDICTED: dihydrolipoyl dehydrogenase, mitochondrial-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C16404
scnpilot_p_inoc_scaffold_445_curated_6
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5896..6174)
DNA (279bp) protein (93aa)
mercury transporter n=1 Tax=Afipia birgiae RepID=UPI0002E015E1
mercuric transporter periplasmic component
Periplasmic mercury ion-binding protein {ECO:0000256|RuleBase:RU361212}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
scnpilot_p_inoc_scaffold_445_curated_7
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6187..6537)
DNA (351bp) protein (117aa)
Mercuric transport protein MerT n=5 Tax=Proteobacteria RepID=A1W5J7_ACISJ
putative mercuric transport protein; K08363 mercuric ion transport protein
Mercuric transport protein MerT {ECO:0000313|EMBL:ABM41522.1}; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_p_inoc_scaffold_445_curated_8
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6572..6997)
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI000364C9FA
Putative mercury transport protein MerC {ECO:0000313|EMBL:EIM01202.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
MerC mercury resistance protein
scnpilot_p_inoc_scaffold_445_curated_9
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7139..7540
DNA (402bp) protein (134aa)
MerR family transcriptional regulator n=1 Tax=Afipia birgiae RepID=UPI0002F40293
transcriptional regulator, MerR family; K08365 MerR family transcriptional regulator, mercuric resistance operon regulatory protein
Transcriptional regulator, MerR family {ECO:0000313|EMBL:ACG77906.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
scnpilot_p_inoc_scaffold_445_curated_10
Brevundimonas nasdae, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7765..8361
DNA (597bp) protein (199aa)
Uncharacterized protein n=3 Tax=Oligotropha carboxidovorans RepID=B6JAA6_OLICO
Uncharacterized protein {ECO:0000313|EMBL:KIC55737.1}; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas nasdae.;"
hypothetical protein
scnpilot_p_inoc_scaffold_445_curated_11
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8354..9373
DNA (1020bp) protein (340aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JAA7_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI05021.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
scnpilot_p_inoc_scaffold_445_curated_12
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9370..10269
DNA (900bp) protein (300aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002E8CC95
Uncharacterized protein {ECO:0000313|EMBL:EXL03898.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
hypothetical protein
scnpilot_p_inoc_scaffold_445_curated_13
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10304..11581
DNA (1278bp) protein (426aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UCA3_RHIRD
Uncharacterized protein {ECO:0000313|EMBL:EGP55081.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens F2.;"
hypothetical protein
scnpilot_p_inoc_scaffold_445_curated_14

Not on your lists

11632..12942
DNA (1311bp) protein (437aa)
Uncharacterized protein n=1 Tax=Thauera sp. 27 RepID=N6XEZ5_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:KKN51326.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
scnpilot_p_inoc_scaffold_445_curated_15
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12951..15809
DNA (2859bp) protein (953aa)
SEC-C motif family protein n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UHX9_RHIRD
Uncharacterized protein {ECO:0000313|EMBL:AJA11477.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
SEC-C motif family protein
scnpilot_p_inoc_scaffold_445_curated_16
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15806..16789
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0HE90_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB11312.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lactosutens DS20.;"
hypothetical protein
scnpilot_p_inoc_scaffold_445_curated_17
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16885..17523)
DNA (639bp) protein (213aa)
Nickel-cobalt-cadmium resistance protein nccN n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R026_BREDI
Nickel-cobalt-cadmium resistance protein nccN {ECO:0000313|EMBL:EGF94105.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
isoprenylcysteine carboxyl methyltransferase
scnpilot_p_inoc_scaffold_445_curated_18
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17741..18172
DNA (432bp) protein (144aa)
ChrB domain-containing protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4P7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG10675.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
ChrB domain-containing protein
scnpilot_p_inoc_scaffold_445_curated_19
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18156..18683
DNA (528bp) protein (176aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IL84_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK65147.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
scnpilot_p_inoc_scaffold_445_curated_20
unknown

Not on your lists

18683..19924
DNA (1242bp) protein (414aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_445_curated_21
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19924..21156
DNA (1233bp) protein (411aa)
Multidrug-efflux transporter n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R879_PHEZH
multidrug-efflux transporter
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
scnpilot_p_inoc_scaffold_445_curated_22
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21490..21945)
DNA (456bp) protein (152aa)
Transcriptional regulator, XRE family n=2 Tax=mine drainage metagenome RepID=T0YYV8_9ZZZZ
DNA, contig: SP662 {ECO:0000313|EMBL:GAN15638.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
helix-turn-helix domain-containing protein
scnpilot_p_inoc_scaffold_445_curated_23

Not on your lists

21984..22238
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=T1ABH1_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD70196.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
scnpilot_p_inoc_scaffold_445_curated_24
Brevundimonas abyssalis, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22462..24003
DNA (1542bp) protein (514aa)
Mobile element protein n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U2ZE89_9CAUL
Mobile element protein {ECO:0000313|EMBL:GAD59407.1}; TaxID=1391729 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas abyssalis TAR-001.;"
istA; transposase
scnpilot_p_inoc_scaffold_445_curated_25
Brevundimonas abyssalis, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24007..24747
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U2YVB1_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:GAD59406.1}; TaxID=1391729 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas abyssalis TAR-001.;"
IstB-like ATP binding protein
scnpilot_p_inoc_scaffold_445_curated_26
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24842..25093
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0HE90_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB11312.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lactosutens DS20.;"
scnpilot_p_inoc_scaffold_445_curated_27
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25121..26482)
DNA (1362bp) protein (454aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P5N4_9BRAD
Site-specific tyrosine recombinase XerD {ECO:0000313|EMBL:CEG10253.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
phage integrase
scnpilot_p_inoc_scaffold_445_curated_28
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26808..28631)
DNA (1824bp) protein (608aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_0016
glucosamine--fructose-6-phosphate aminotransferase (EC:2.6.1.16); K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16]
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TZZ3_9PROT
scnpilot_p_inoc_scaffold_445_curated_29
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28635..29948)
DNA (1314bp) protein (438aa)
N-acetylglucosamine-1-phosphate uridyltransferase; K04042 bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
Bifunctional protein GlmU n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TZZ2_9PROT
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
scnpilot_p_inoc_scaffold_445_curated_30
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30086..30748
DNA (663bp) protein (221aa)
Phosphoglycolate phosphatase {ECO:0000256|SAAS:SAAS00077902}; EC=3.1.3.18 {ECO:0000256|SAAS:SAAS00077902};; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
gph; phosphoglycolate phosphatase (EC:3.1.3.18); K01091 phosphoglycolate phosphatase [EC:3.1.3.18]
Phosphoglycolate phosphatase n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4TZZ1_9PROT
Displaying items 1-30 of 89 in total

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