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scnpilot_p_inoc_scaffold_62_curated_13

Organism: scnpilot_dereplicated_Magnetospirillum_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: 14465..16459

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4U313_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 91.6
  • Coverage: 670.0
  • Bit_score: 1157
  • Evalue 0.0
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.6
  • Coverage: 670.0
  • Bit_score: 1157
  • Evalue 0.0
RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor similarity KEGG
DB: KEGG
  • Identity: 82.8
  • Coverage: 679.0
  • Bit_score: 1064
  • Evalue 0.0

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Taxonomy

Magnetospirillum gryphiswaldense → Magnetospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1995
ATGGCGACCAAACCTCAGAATACGGCGGAAGTCAACGAGAGCCAGGACGAGAACCTGGACGGTCCGCTGCTCGACGCGCTGGGCGTCGCCGTCAAGAAAATGGTCACCCGCGGCCGCGAGCGCGGATACGTGACCTATGACGAACTGAACGCTGCCCTGCCGCCCGACGAAGTGTCGTCGGAACAGATCGAAGACACCATGGCCATGCTGTCCGAAATGGGCATCAACGTGGTGGAAAGCGAAGAAACCGACGAAGCCGCCTCGCCGGAAGCCGAGGAAGAGGAAACCGAATCCAGTTCCGGCGCCGGCAACGTCGACGAAGAGGATTTGGGCCGCACCGACGACCCCGTGCGCATGTATCTGCGCGAAATGGGCTCGGTGGAACTGCTGAGCCGCGAAGGCGAAATCGCCATCGCCAAGCGCATCGAAGCCGGCCGCGAGATGATGATCGGCGGCATCTGCGAAAGCCCGCTGACCATCCGCGCCGTCATCGAATGGCACGACGCCCTGCAGCAGGGCCGCATGCTGCTGCGCGACATCATCGACCTGGACGCCACCTATGGCGCCGGCCTCAGCGAAGAGGAAATGGAAGCCGAAGTCGCCGAGGACGCGGAAGAGGCTGAGGCCAAAACCGAGGACGAAGCCGCCGAAGGCGAGGAAGGCGAGCGCGAAGGCGAAGCCGGCGAGAACGGCGAAGGTGGCGAGGGCGAAGGCGAGGGGGAAGAGAACTCCATCTCGCTGGCCGCCATGGAAGCCGCGCTGATGCCGCAGGTTCTGGAAACCTTCGAAGCCATCGCCGCCACCTTCCTGAAGATGGAAAAGGCCCAAAAGGACCGCATGGCGGCGTTGTCCAAGGGCGAGAACGTGTCGGCGGCGCTTGAGAAGAAGTACGACAAGCTGAAGGCGGAAATGGTCCGCCTGATGGAAGACGTGCATCTGAACAACGCCCGCATCGAGCAGCTGGTCGAACAGATGAACGGCCTCAACAAGCGGCTGATGGGCATGGAAGGCCGTCTGCTGCGTCTGGCCGAATCGTGCAAGGTCAAGCGCCAGGACTTCCTGGACAGCTATTTCGGCTCGGAACTGGACCCCAACTGGCTGGAAACCGTGGGTGTCAAGTCCAAGCAGTGGAAGGACTTCTCGGAAAAGCACAAGCGCGACGTCACCGACCTGCGCACCCAGATCGGCGTGGTCTCGGCCGAAGCCGGCCTGCCCATCACCGAATTCCGCCGCATCATCCAGACCGTGCAGCGCGGCGAGCGCGAGGCCAGCAAGGCCAAGAAGGAAATGATCGAGGCCAACCTGCGCCTGGTCATCTCGATCGCCAAGAAGTACACCAATCGCGGCCTGCAGTTCCTGGACCTGATCCAGGAAGGCAACATCGGCCTGATGAAGGCGGTGGACAAGTTCGAATACCGTCGCGGCTACAAGTTCTCGACCTACGCCACCTGGTGGATCCGTCAGGCCATCACCCGGTCCATCGCCGACCAGGCGCGCACCATCCGTATCCCGGTGCACATGATCGAGACCATCAACAAGCTGGTCCGCACCTCGCGCCAGATGCTGCACGAGATCGGCCGCGAGCCGACCCCGGAAGAACTGGCGGAAAAGCTCAGCATGCCCCTGGAAAAGGTGCGCAAGGTGCTGAAGATCGCCAAGGAACCCATTTCCTTGGAAACCCCCATCGGCGACGAGGAAGACAGCCATCTGGGCGACTTCATCGAGGACAAGAACGCCGTCCTGCCGCTGGATGCCGCGATCCAGGCGAACTTGCGCGAAACCACCACCCGGGTGCTGTCCAGCCTGACGCCGCGTGAAGAACGTGTGCTGCGCATGCGCTTCGGCATCGGCATGAACACCGACCACACCCTGGAAGAAGTGGGGCAGCAGTTCAGCGTCACCCGCGAACGTATCCGTCAGATCGAAGCCAAGGCGCTCCGGAAGCTCAAGCACCCGTCGCGAAGCCGCAAGCTGCGCAGCTTCCTCGACACCTAG
PROTEIN sequence
Length: 665
MATKPQNTAEVNESQDENLDGPLLDALGVAVKKMVTRGRERGYVTYDELNAALPPDEVSSEQIEDTMAMLSEMGINVVESEETDEAASPEAEEEETESSSGAGNVDEEDLGRTDDPVRMYLREMGSVELLSREGEIAIAKRIEAGREMMIGGICESPLTIRAVIEWHDALQQGRMLLRDIIDLDATYGAGLSEEEMEAEVAEDAEEAEAKTEDEAAEGEEGEREGEAGENGEGGEGEGEGEENSISLAAMEAALMPQVLETFEAIAATFLKMEKAQKDRMAALSKGENVSAALEKKYDKLKAEMVRLMEDVHLNNARIEQLVEQMNGLNKRLMGMEGRLLRLAESCKVKRQDFLDSYFGSELDPNWLETVGVKSKQWKDFSEKHKRDVTDLRTQIGVVSAEAGLPITEFRRIIQTVQRGEREASKAKKEMIEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLVRTSRQMLHEIGREPTPEELAEKLSMPLEKVRKVLKIAKEPISLETPIGDEEDSHLGDFIEDKNAVLPLDAAIQANLRETTTRVLSSLTPREERVLRMRFGIGMNTDHTLEEVGQQFSVTRERIRQIEAKALRKLKHPSRSRKLRSFLDT*