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scnpilot_p_inoc_scaffold_62_curated_52

Organism: scnpilot_dereplicated_Magnetospirillum_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: 56394..57236

Top 3 Functional Annotations

Value Algorithm Source
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.3
  • Coverage: 278.0
  • Bit_score: 480
  • Evalue 1.60e-132
dapF; diaminopimelate epimerase; K01778 diaminopimelate epimerase [EC:5.1.1.7] similarity KEGG
DB: KEGG
  • Identity: 70.7
  • Coverage: 283.0
  • Bit_score: 393
  • Evalue 5.90e-107
Diaminopimelate epimerase n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F5W9_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 85.3
  • Coverage: 278.0
  • Bit_score: 480
  • Evalue 1.20e-132

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Taxonomy

Magnetospirillum gryphiswaldense → Magnetospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 843
ATGACCGACCACGCCGCCCTTTCGTTCCGCAAGATGCATGGCCTGGGCAACGATTTCGTTGTCCTGGACGCCCGCGACCATCCGCTTGACCTGACCCCGGCCATGACCCGGGCCATCGCCGACCGCCGCACCGGCATCGGCTGTGACCAGTTGGTGGTGATCGAGGCGGCGCGCTCCACCCTGTCCGACGCCTGGATGAGCCTGTGGAACGCCGACGGTTCGCAGACTTCGGCCTGCGGCAACGCCACGCGCTGTGTCGCCTGGCTGCTGATGGAGCAAGGCGGCGGCGATCGGGTGGTCATCGAAACCAAGGCCGGTCTGCTGGATGCCGAACGGCGTGGGCCGAAGCTGATCGCCGTGGACATGGGACCGGCGCGTCTGGATTGGCGTGAAATCCCGGTGGCCAAGCCGGTGGACACCTTGAACATGGGCATCGGCGTCGGCGCGCTGCACAACCCGGTGGGGGTCAGCATGGGCAACCCCCATGCGGTGTTTTTCGTCGACGACGTCGCCGCCATCGACCTGGCGGCGCTGGGGCCGGTGCTGGAACATCACGATTTCTTCCCCGAGCGGGCCAACATCGAAGCAGCCCAGGTTCTGGGGCCGGATCGCATCCGCATGCGGGTGTGGGAACGCGGCACCGGCATCACCAGTGCCTGCGGCACCGGCGCCTGCGCCACTTTGGTGGCGGCCGCCCGTCGCGGCCTGACCGGGCGCAAGGCTGACGTTATTTTGGATGGCGGCACCCTGACCATCGAATGGCTGCCCGACGACCATGTGCTGATGACCGGCCCGGTGGCGCTGGTGGCGGAAGGAAAGCTGGATTCCAGCTTGTGGGAATGA
PROTEIN sequence
Length: 281
MTDHAALSFRKMHGLGNDFVVLDARDHPLDLTPAMTRAIADRRTGIGCDQLVVIEAARSTLSDAWMSLWNADGSQTSACGNATRCVAWLLMEQGGGDRVVIETKAGLLDAERRGPKLIAVDMGPARLDWREIPVAKPVDTLNMGIGVGALHNPVGVSMGNPHAVFFVDDVAAIDLAALGPVLEHHDFFPERANIEAAQVLGPDRIRMRVWERGTGITSACGTGACATLVAAARRGLTGRKADVILDGGTLTIEWLPDDHVLMTGPVALVAEGKLDSSLWE*