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scnpilot_p_inoc_scaffold_1331_curated_1

Organism: scnpilot_dereplicated_Microbacterium_6

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 1..2109

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B38D30 similarity UNIREF
DB: UNIREF100
  • Identity: 39.9
  • Coverage: 681.0
  • Bit_score: 413
  • Evalue 3.40e-112
Putative Transcriptional regulator, winged helix family {ECO:0000313|EMBL:CCH77462.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 36.3
  • Coverage: 683.0
  • Bit_score: 385
  • Evalue 1.80e-103
winged helix family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 36.3
  • Coverage: 692.0
  • Bit_score: 311
  • Evalue 7.40e-82

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Taxonomy

Tetrasphaera japonica → Tetrasphaera → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2109
ACCTCCGGTCACCGATGCGAGTTGTCAGATACCCACATCGTCCCGGAGGTCTTCACCTACCCGCGACGCACACAACGTCCCGGGTCGCTACACCTAGCCCCGCCACTGCCCCTCCCGCGGCGGACGACGTCGCTGGTCGGTCGCGCGAGCGACCTCGAGCGGATCTCGCGCCTGGTCCTCAGCCGCAGACTCGTGACCCTCACCGGGGCGGGCGGATGCGGGAAGACGCGGTTGGCTCTCGAAATCGCGCATCACCTCGCATCCGACTTTCCGGACGGGGTGTACTTCGTCGATCTCGCGACGATCGATGACGAGACGATGGTTGTCGACCTCGTCGCGTCGACGTTGCGCCTGGCCCCCGCCGTCGTCGGCTCCGCCTTGGAGGCGACGGTTGATCATCTTCGTCGACGGCGGACGCTGCTCATTCTGGACAACTGCGAGCACGTCCTCTCGGGCGCTGCGGCGTTCGTCGAGCATCTTGCTGAGGCCGAGGCGCGCTGTGCTGTTGTCCTGACCAGTCGCGAGGCCGTCTCGTTCCCGGGCGAAGTGATCTGGACGCTCGGCCCGCTGCCCGTTGACCCACCCCCTGCCGGCGGTCCCGCGCCCGCCGTCGAGCTCTTCTTGGCGCGTCTTGCGGAGGCCGTACCCGAGCTGGCGATCGACGAACACACCCGAGCGGAGGCTGAACGGCTGTGCGCCGCGATCGACGGGCTGCCGTTGGCCATCGAGCTGGCGGCGGCTCGTGTACGCACCGACGGCCTCGCTGCCGTCGTCGCACAGGCACAGACGGATCCTGCGCGACTGCGGCGACTGACCAGCACTCAGCGCACCCACCACGACAGCGTCGGCGACGCCATCGAATGGAGCTATCGCACGCTGACCGCGGGTGAGCAGATTCTGCATCGTCGGTTGGCGGCGCTGCCGGGCCCGTTCACGGCCGAGGCCGCTGCTGCGGTCGCCGTGACATCCGGCCTGTCCGCTCCGGCTGTTGAAGCAGAGGCGGTGGGTGACCTCCTGTCTTTGCTGTGCCATCGCTCGTTGTTGGTGCCCGTGCCGCCGTCGACCTCACCCGGTCGCGCGCGGTTTAGGCAGCTGGCGACTGTCCGCTCCCACGCTCGGCGGGCGATGCGGATGGAAGGAGAGCTGGAAGCGGCCGAGAAGGCCCGGGATGCCTGGGTCGCCGCACTCGTCACCCGCCGACCTCGCGTTTTCGATCCTGATCCCGACGGCTGGTACGACGCGATCGACGACGACTTCGACGCGGTTCGCAGCACGCTGCATCGTCAGCTCGTCGAGAAACCGAGCCCCGCGGGGGCATCACTGGTGATCGGGCTCGGCGGGTACTGGTACCTCCGCCGCCGTCTCGTCGAGGGCCTGACCTGGCTTGAGCTTGCTGAGCAGGTGGACGCACTCTCTTCTGCGGATGCGGCAAGCCTGCACTGCGCGCTCGCTGTTCGCTACGTTCTGCAAGGACGGAGCGATCTCGCCACTGCGCATATAGAGATGGCGCGCGCCGGACTTGCGCGGTCCATGGATGTCGACCTCGCGTGGGCGCTCGCTGGTCTGGCCTACGCTTTGCTCACTGGCTCCGAGTCGGGGCTTGTCGCAACGGTCACCGGCGACATCGTCGAGGTCGCGTCCGCGCTCGGCGACCCCGCCCTCGCCGTCGTCGCCGAGGCGCTGGTGGCATCGGCCGTGTCCGGTCCGAATGCGGAGGGGGTGCGTCATGTCTACGATCGCGCGATTCGTGCGGGCAATACGTTTGCGGCGTCGATCTGCGCGTCGTATCTCAGCCTCTATGCGTTGGCGACGAAGGACCCTGAGACGGGCGAAATGTGGGTTGGCCGCGGTCGTGATCTTCACGCCACGGTTGGCGGACTCGCATTTAGTGGCTTCGATGAGAACGCAGCCGACTTCGCGGCGATGGCGGGCGACTACCGTCGCGCCGCCGCGCTTTACGGGAGGTCCAGTGCGGCGGCGTTTCGTGATGGTACCGTCTGGCCACGGCAGCCAGCGACCCGCGAGCTACTGCGCCGCACCGAGGAAGCCCTCTCGCGCGGGGAGTTCCGCCGCGCCTGGCGCGAGGGTGAGGGGCTCGGGTCCGAGTAG
PROTEIN sequence
Length: 703
TSGHRCELSDTHIVPEVFTYPRRTQRPGSLHLAPPLPLPRRTTSLVGRASDLERISRLVLSRRLVTLTGAGGCGKTRLALEIAHHLASDFPDGVYFVDLATIDDETMVVDLVASTLRLAPAVVGSALEATVDHLRRRRTLLILDNCEHVLSGAAAFVEHLAEAEARCAVVLTSREAVSFPGEVIWTLGPLPVDPPPAGGPAPAVELFLARLAEAVPELAIDEHTRAEAERLCAAIDGLPLAIELAAARVRTDGLAAVVAQAQTDPARLRRLTSTQRTHHDSVGDAIEWSYRTLTAGEQILHRRLAALPGPFTAEAAAAVAVTSGLSAPAVEAEAVGDLLSLLCHRSLLVPVPPSTSPGRARFRQLATVRSHARRAMRMEGELEAAEKARDAWVAALVTRRPRVFDPDPDGWYDAIDDDFDAVRSTLHRQLVEKPSPAGASLVIGLGGYWYLRRRLVEGLTWLELAEQVDALSSADAASLHCALAVRYVLQGRSDLATAHIEMARAGLARSMDVDLAWALAGLAYALLTGSESGLVATVTGDIVEVASALGDPALAVVAEALVASAVSGPNAEGVRHVYDRAIRAGNTFAASICASYLSLYALATKDPETGEMWVGRGRDLHATVGGLAFSGFDENAADFAAMAGDYRRAAALYGRSSAAAFRDGTVWPRQPATRELLRRTEEALSRGEFRRAWREGEGLGSE*