ggKbase home page

scnpilot_p_inoc_scaffold_1331_curated_4

Organism: scnpilot_dereplicated_Microbacterium_6

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: comp(5143..5613)

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Microbacterium sp. B19 RepID=UPI0003451705 similarity UNIREF
DB: UNIREF100
  • Identity: 49.0
  • Coverage: 155.0
  • Bit_score: 140
  • Evalue 1.60e-30
Uncharacterized protein {ECO:0000313|EMBL:KEP75066.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.7
  • Coverage: 155.0
  • Bit_score: 135
  • Evalue 5.60e-29
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 46.8
  • Coverage: 156.0
  • Bit_score: 134
  • Evalue 3.60e-29

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium sp. SUBG005 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 471
GTGCGCTCCGCAGTGCTGCAGCTTCTGCAGGAGCGCGGCAGCGGCCAGTTCTCGATCGCCGAGACCCAGGATCGTGTCCGCACTGCCGGGCTCGGAGCAGCCACGTTCGAGCAGGCAGTGACCTCGGTCGTGACCGCATACGCCGAGCTGCTGCGACAGAACCGCGAACTGCTGTCGCCGTTCTTCTTGCTCGGCGTCGAGGACTTCGCCATCCGCGACCGCGGCCGCCAGTCCGCCGACGCGGAACAAGCAAGTCTTCATTCGCGCACTGCTGGCCGCCCGCCGCCCAAGAGAACAGGGTCGAGTTGGCCACCGCGCGCGGACTGGGCTTTCGAAGTCTTCTACAGCTTGAGCGGCCGCTATCTCGGCCTCGGTGTCGCGGCGACGGTCAGCCCCGAGAACGACTACGACTGGAACGACCTCCTCGGACGTCTCGCTGACACCGTTCACCTGATCCTCACGTCGAGCTAA
PROTEIN sequence
Length: 157
VRSAVLQLLQERGSGQFSIAETQDRVRTAGLGAATFEQAVTSVVTAYAELLRQNRELLSPFFLLGVEDFAIRDRGRQSADAEQASLHSRTAGRPPPKRTGSSWPPRADWAFEVFYSLSGRYLGLGVAATVSPENDYDWNDLLGRLADTVHLILTSS*