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scnpilot_p_inoc_scaffold_1331_curated_7

Organism: scnpilot_dereplicated_Microbacterium_6

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: comp(8304..9893)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Pseudoclavibacter faecalis RepID=UPI000361AB95 similarity UNIREF
DB: UNIREF100
  • Identity: 46.4
  • Coverage: 506.0
  • Bit_score: 394
  • Evalue 1.60e-106
Carbohydrate diacid transcriptional activator CdaR {ECO:0000313|EMBL:KJQ53909.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.8
  • Coverage: 509.0
  • Bit_score: 414
  • Evalue 2.10e-112
regulatory protein similarity KEGG
DB: KEGG
  • Identity: 42.7
  • Coverage: 510.0
  • Bit_score: 378
  • Evalue 3.70e-102

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Taxonomy

Microbacterium sp. SA39 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1590
GTGCTCCGCGGAGCCGGCTCGCGTCGTTCACAATTGTCGTACTGCGAACTCTTCGATCGACAGATTGGCACGACAATTCCGACGACACTGCGCTCCCTTCTAGCTGTTCGGGCGTTCGGTCTGCGCGCCGTGGGCGAGCTTGATGCTGCTCACCTCGACCGGACCATCTCGTGGGTTCACAACTCCGACCTCCCCGATCCCACGCCATGGCTCGAACCCGGGCAGCTACTGCTGACCGACGGCGGGCAGTTCGCCGGACCGACCCCAACCTCTCCCGAGGCCTACTGCCGCCGACTCCGCCAGCGCGGGGTGGCTGGATTGGGGTTCGCGACGGACGTCATTCACCCGGAGGTTCCTACCGAGCTCATCGATGCATGCCGCCGCCACGAGATCCCCCTCATCGAGGTGCCCGGCATGACGCCGTTCATCGGCATCATCCGGCACGTCGCGGATGCCGAAGCCGCCGATCGTAGCGCGCGACTGTCGTGGACACTCGAATCACAGCGAGCCCTGGCTCGGGCAGCCGTGCGCCAAGACGGCCTGCGTGCGATTCTGCGCACCCTCTCCTCCCGGCTTCGCACCTGGGTGGCGCTTTTCGATGCGGCGGGACGACCCCTCAGCCTGCCGGGAATCGCCGAGGTTCCGGCATCCGTCGAGTCCGCAGTCGCGGAGCAGGCGCGGATGCTGCTGCGCAAATCCACACCGGCGAGCATCCGCGTCGCTGAGCCCCATGCCGCGACGCTGCAGACGATAGGTCAGAGCGGGCGACTCGGTGGCGTCCTCGCCGTGGGCGCCGACACCCCGCTTGATTCCGCGCACAGCGATCTCGTCGAGTCGGTCATCGCCCTGGCGAGCATTGCTCTTGAGCAGCAGCGAGCAGTCTCGGACGCGCGTCTGCGGGTGCGGACCGGGGTCATCGAGCTGCTGTTGGCCGGCCGCTCAGAAGAAGCTTCCCGCTCAGCGACGGCGCTGTGGGGACGGATGCCGACACCGCCGCTGCTGGCCGGTCAGGTCGTCGGGTTCACCGGCAGTCAGTCACTTCTCGACGAGCTTGAGCTTTCCGCAGCGGCGGAACCGGGCATCCTCTTCTTCGCCGAACGTGAGGAGGACCTGCTGATCCTGGTCGCTCGCGATGGGCTCGCGGGGCTAGCCGATCTGCTGCAGAAACATGAAACCACCGCAGGGTTCGCCGAGCTCCATCGATGGGAAGAACTCGGCCGCGCGCTGGCCGAGGCGTCCCATGCTGCTCGACAGTCGAGCGAGCCCGGGGTCATCGAGTTCTCGGCGATCGCCGACAACGGCATGATCGGCATGCTGCGGAACAACGGCGGTCCGCTCGTCGCCCGCCGCATGCTCGCGCCGCTGGATCAGCTGGCTCCAGCGCACCGTGAACGTCTGCTGGCCGCCGCTACCGCTTGGTTCGCCGCCAACACCGCATGGGACCCAGCTGCCCGCAGCCTCGACATCCACCGACACACTCTGCGCGCCCGCATCGATGAATTGGGCGAATTCCTCGGCCTGGATCTGTCGACCTTCGATGGTCGCGCTCAGCTATGGGCGGCGATGGAGCTCTCCTCCGCCGAACGATGA
PROTEIN sequence
Length: 530
VLRGAGSRRSQLSYCELFDRQIGTTIPTTLRSLLAVRAFGLRAVGELDAAHLDRTISWVHNSDLPDPTPWLEPGQLLLTDGGQFAGPTPTSPEAYCRRLRQRGVAGLGFATDVIHPEVPTELIDACRRHEIPLIEVPGMTPFIGIIRHVADAEAADRSARLSWTLESQRALARAAVRQDGLRAILRTLSSRLRTWVALFDAAGRPLSLPGIAEVPASVESAVAEQARMLLRKSTPASIRVAEPHAATLQTIGQSGRLGGVLAVGADTPLDSAHSDLVESVIALASIALEQQRAVSDARLRVRTGVIELLLAGRSEEASRSATALWGRMPTPPLLAGQVVGFTGSQSLLDELELSAAAEPGILFFAEREEDLLILVARDGLAGLADLLQKHETTAGFAELHRWEELGRALAEASHAARQSSEPGVIEFSAIADNGMIGMLRNNGGPLVARRMLAPLDQLAPAHRERLLAAATAWFAANTAWDPAARSLDIHRHTLRARIDELGEFLGLDLSTFDGRAQLWAAMELSSAER*