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scnpilot_p_inoc_scaffold_931_curated_17

Organism: scnpilot_dereplicated_Microbacterium_6

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 15480..16319

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.6
  • Coverage: 250.0
  • Bit_score: 400
  • Evalue 2.20e-108
rsuA; 16S rRNA uridine-516 pseudouridylate synthase; K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] similarity KEGG
DB: KEGG
  • Identity: 81.0
  • Coverage: 247.0
  • Bit_score: 389
  • Evalue 6.50e-106
RNA pseudouridine synthase n=1 Tax=Microbacterium sp. 292MF RepID=UPI000372E91E similarity UNIREF
DB: UNIREF100
  • Identity: 78.5
  • Coverage: 261.0
  • Bit_score: 402
  • Evalue 3.10e-109

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Taxonomy

Microbacterium ginsengisoli → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 840
ATGACGGCCTCCGGATTCCCCTCAGAGAGCCCCGACGGGGTGCGCCTGCAGAAGGTGCTCGCCGCGGCCGGTGTCGCATCGCGCCGCGTTTCTGAGCAGCTGATCGCGGCGGGACGCGTTCGGGTGAACGGGCGGGTCGTGACCGAACTCGGGACGCGTATCGATCCGACCACGGACCTGGTGGATGTCGACGGCGTCGCGGTGCAGCTCGATGAGAGCAAGCGCTATGTCGTGCTCAACAAGCCGCGCGGCGTCGTCAGTTCGATGCGCGACGAGCGGGGCAGGCCGGACCTGCGCGAATACGCGGCGGAGTGGTCGGAGCGACTCTTCAACGTCGGACGCCTGGATGCCGATACGAGCGGGCTGCTCGTTCTCACGAACGACGGCGACCTCGCGCATGTGCTCTCGCACCCCTCGTTCGGGGTGACGAAGGTGTATATCGCCAAGGTCGAAGGTCGCGTGACGCCGCAGACGATTGCGCGGCTGACCCGTGGTGTGACGCTCGAGGACGGACCGATCGCCGCCGACAAGGCGCGGCTGCTGTCGGCATCCGATGCCGGAGGTGGCTCGCTCGTGGAACTCACGCTGCACTCGGGCCGTAATCGCATCGTGCGACGGATGATGGCCGAGGTGGGGCATCCGGTCGTTGAACTGGTGCGCCGACAGTTCGGCCCGCTGCACCTGGGAAGCCTCCCGGTTGGGGCTGTGCGGGAGTTGACTACAGTAGAACGTGGCGCATTGCTGACTCTTGCGCGCCGCGAGGGTGACCCGCAGCAAGAGACCCCGCGCCACGAGGCTGACGACTCTTCGTCGCCCGATTCTCAGGAGACTTCCCCGTGA
PROTEIN sequence
Length: 280
MTASGFPSESPDGVRLQKVLAAAGVASRRVSEQLIAAGRVRVNGRVVTELGTRIDPTTDLVDVDGVAVQLDESKRYVVLNKPRGVVSSMRDERGRPDLREYAAEWSERLFNVGRLDADTSGLLVLTNDGDLAHVLSHPSFGVTKVYIAKVEGRVTPQTIARLTRGVTLEDGPIAADKARLLSASDAGGGSLVELTLHSGRNRIVRRMMAEVGHPVVELVRRQFGPLHLGSLPVGAVRELTTVERGALLTLARREGDPQQETPRHEADDSSSPDSQETSP*