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scnpilot_p_inoc_scaffold_931_curated_31

Organism: scnpilot_dereplicated_Microbacterium_6

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: comp(29300..31042)

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent RNA helicase DeaD {ECO:0000256|HAMAP-Rule:MF_00964}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00964};; Cold-shock DEAD box protein A {ECO:0000256|HAMAP-Rule:MF_00964}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.6
  • Coverage: 584.0
  • Bit_score: 1047
  • Evalue 0.0
deaD; superfamily II DNA and RNA helicase; K05592 ATP-dependent RNA helicase DeaD [EC:3.6.4.13] similarity KEGG
DB: KEGG
  • Identity: 81.6
  • Coverage: 583.0
  • Bit_score: 910
  • Evalue 2.30e-262
cold-shock protein n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B6009E similarity UNIREF
DB: UNIREF100
  • Identity: 81.9
  • Coverage: 591.0
  • Bit_score: 926
  • Evalue 9.80e-267

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Taxonomy

Microbacterium sp. C448 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1743
ATGGCTTCTTCCCTCGAAAACGTAACCGACGAGGTTGAGCCTCCTCGATCCGAACCCGCATTCGCTGAGCTCGGTCTCAGCGACGCGGTCATGAAGGCGTTGAAGGACGTCGGGTACGAGACACCGTCCGCCATCCAGGCCGCCACCATCCCTCCTCTGCTCGCCGGACGCGACGTCGTCGGGCTCGCCCAGACCGGCACGGGAAAGACTGCGGCGTTCGCGCTGCCGATCCTCTCTCGACTCGATCTCTCGCAGAAGACGCCGCAGGCGCTCGTGCTCGCACCTACTCGTGAACTCGCCCTGCAGGTGTGCGAGGCGTTCGAGAAGTACGCGTCGCACCTGCGCGGCGTGCACGTGCTGCCCGTGTACGGCGGACAAGGTTATGGCCAGCAGCTCTCGGCTCTCCGCCGCGGGGTGCACATCGTGGTCGGCACCCCTGGCCGCATCATGGACCATCTCGACAAGGGCACACTGGATCTGTCGGAGCTGAAGTACCTCGTGCTCGACGAGGCCGACGAGATGCTGAAGATGGGCTTCGCCGAGGATGTCGAGACGATCCTCGACGACACCCCGAGCACCAAGCAAGTGGCTCTGTTCTCGGCGACGATGCCCGCGCAGATCCGGCGCATCTCGGCGCAGTACCTGAGCGACCCCGAAGAGATCACGGTCAAGACCAAGACCACCACCTCGGCCAATATTTCGCAGCGGTACCTGGTGGTGTCGTACCCGCAGAAAGTCGATGCGCTCACCCGCATCCTCGAGGTCGAGAACTTCGAGGGCATGATCGTCTTCACCCGCACGAAGAACGAGACCGAGACCCTCGCCGAGAAGCTGCGCGCCCGCGGATACACGGCAGCCGCGATCAGCGGCGATGTCGCGCAGGCTCAGCGCGAGCGCACCGTCAATCAACTCAAGAGCGGCAAGCTCGACATCCTGGTGGCAACGGATGTCGCGGCCCGAGGCCTCGACGTCGACCGCATCAGCCACGTCGTGAACTACGACCTACCGATCGACACCGAGTCATACGTCCACCGCGTCGGGCGAACGGGACGAGCCGGTCGCACGGGAGCAGCGATCAGCTTCGTCACCCCGCGCGAGCGGCGCATGCTGACCTCGATCGAGAAGGCCACTCGGCAGCCGCTGACCGAAATGAAGCTGCCGAGTGTCGACGACGTCAACGCCACACGACTCACGCGCTTCGACGACGCCATCACGGCGGCGCTCGCAGATCCCGAGCAGATCAGCCGGTTCCGCGACATCGTCGCGCACTACGTCGAGCATCACGATGTGCCCGAGGCGGACGTCGCGGCGGCGCTCGCCATCGTCGCGCAGGGCGACACGCCACTGCTGCTCGAGCCGGATGCCGCACCCGAGCCGCGCTTCTCACGTGATTCGCAGGACCGATCCGGGCACGGCGGACGGGACCGCGGCGACCGCTCCGATCGCGGCCCCCGCGGCGGAGGCGGATCTCGAACGACCTACCGGATCTCGGTCGGCCGGCGCCACAAGGTTGAGCCGCGTCAGATCGTCGGAGCCCTCGCCAACGAGGGCGGTCTTCGCCGCGAAGATTTCGGCGCGATCCAGATCCGCCCCGACTTCTCGCTCGTCGAGCTGCCAGCCGATCTGTCCCGCGACACGCTGAAGCGCCTCGAGAACACACGCATCAGCGGCAAGCTGATCGAGCTCAAGCCCGACCGTTTCGGCAACTCGGCTAAGCGCGAGAACCGCCCCCCGCGCCGCTGA
PROTEIN sequence
Length: 581
MASSLENVTDEVEPPRSEPAFAELGLSDAVMKALKDVGYETPSAIQAATIPPLLAGRDVVGLAQTGTGKTAAFALPILSRLDLSQKTPQALVLAPTRELALQVCEAFEKYASHLRGVHVLPVYGGQGYGQQLSALRRGVHIVVGTPGRIMDHLDKGTLDLSELKYLVLDEADEMLKMGFAEDVETILDDTPSTKQVALFSATMPAQIRRISAQYLSDPEEITVKTKTTTSANISQRYLVVSYPQKVDALTRILEVENFEGMIVFTRTKNETETLAEKLRARGYTAAAISGDVAQAQRERTVNQLKSGKLDILVATDVAARGLDVDRISHVVNYDLPIDTESYVHRVGRTGRAGRTGAAISFVTPRERRMLTSIEKATRQPLTEMKLPSVDDVNATRLTRFDDAITAALADPEQISRFRDIVAHYVEHHDVPEADVAAALAIVAQGDTPLLLEPDAAPEPRFSRDSQDRSGHGGRDRGDRSDRGPRGGGGSRTTYRISVGRRHKVEPRQIVGALANEGGLRREDFGAIQIRPDFSLVELPADLSRDTLKRLENTRISGKLIELKPDRFGNSAKRENRPPRR*