ggKbase home page

scnpilot_p_inoc_scaffold_461_curated_1

Organism: scnpilot_dereplicated_Microbacterium_6

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 2..2392

Top 3 Functional Annotations

Value Algorithm Source
TrwC relaxase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E306_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 61.0
  • Coverage: 780.0
  • Bit_score: 898
  • Evalue 6.70e-258
Conjugal transfer protein {ECO:0000313|EMBL:EXJ52921.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.1
  • Coverage: 796.0
  • Bit_score: 1332
  • Evalue 0.0
conjugative relaxase domain protein, TrwC/TraI family similarity KEGG
DB: KEGG
  • Identity: 59.9
  • Coverage: 781.0
  • Bit_score: 892
  • Evalue 1.20e-256

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium sp. MRS-1 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2391
GCGAAGCTCCTGCGCGCGGAGGATGTGCCGCTGGAGCGGATCGCCAGGCTCGGCGCGTCGGTGGTCGCCGCGGTTGCCGAGAAGCGCACGACGTGGAGCCACTGGAATCTCTACGCCGAGGCCGCACGCCAGACGATGGGCTGGCGCTTCACCGCCACCGAGGACCGCGAGGCGATCACGGGGATGGTCACCGACGCCGCGGAGCAGGCGTCCATCCGGCTCACGCCGCCCGAGCTGGCCTCCAGCCCCGCCGCGTTCCAGCGCGCGGACGGGACGAGCATGTTCCGCCCCCGCAACACCGCCCGCTACAGCGGTGCCGCGGTGCTCGCCGCCGAGGACCGTCTGCTTGCACGCTCCCGCGAGCAGGTTGCACCGCGCCTGGCCGACGCAACCATCGCGCACGCGCTGCAACCCCACCGTGGGCGCACGCTCGGCGACGACCAGCGCGCCGCGCTCGCAGCGATTGCGTCGTCGGGTCGGGTACTCGACCTGCTCGTCGGCCCTGCGGGGGCGGGGAAGACCACCGCGCTGCGCGCGCTGCGGCGTGCGTGGGAGGCCGAGCACGGGCGCGGCGCGGTCGTCGGTCTGGCACCGTCCGCGGTCGCGGCCGAGGTGCTGGCCGGTGACCTCGGCATCCCGACGGAGAACACCGCGAAGTGGTGGCAGACCCACCGCGACCACGGCACCGGGTTCACCGCCGGGCAGCTCGTGATCGTGGACGAGGCATCCCTCGCCGGGACGCTCGCGCTCGACCGGCTCGTGCGCGTCGCAGCCGACGCCGGAGCGAAGGTGCTGCTCGTGGGCGATCCCGCGCAACTCCAGTCCGTCGACGCCGGGGGAGCGTTCGGGATGCTCGTCGCCGACCGTGCCGACGTGCCCGAGTTGACCGACGTGCGCCGCATCACCGCAGCCTGGGAGAAGGGTGCCACCCGCGATCTACGCAACGGCCGCATCGAAGCCATCGACACCTACCAGGCCCACGGTCGTATCCGGGCGGGCGAAACCGAGCGCATGGCCGACGCCGCCTACGCCGCCTGGCAGCGCGACCGCGCGTTGGGGCTGGCGAGCATCCTCATTGCCGAGTCGAGCGCGATGGTCACCACCCTGAACCGGCGCGCCCGCGCCGACCTCATCCTCGCCGGGCAGGTCGACGCGCGCGCCGAGGTGCGGCTGCACGACTGCACCGAGGCGTCCGTCGGGGACGCGATCATCACCCGCCGCAACGACCGTGAACTGCGCACCGGACGCGGCTGGGTGCGCAACGGCAGCCGGTGGACGATCACCGCCATCGGCATCGACGGGTCGCTACGAGTGCGGCCTGCCGGGCGACGCGGAGGCGCGACGCTGCGACTCCCTGCCGGATACGTCGCCGAGCATGTCGAACTCGGCTACGCGGTCACCGCATACCGGGCGCAAGGAGTCACGGTCGACACCGGACACACGCTCATCGAGCCCGGCGCGACCCGCGAGAACTTCTACGTCGCCATGACCCGTGGCAAGGCCGGGAACTTCGCCTATGTCTCCCTCAACCGCCCCGATGATGACCACATTCACCCGCCCGCTCAGGACACCCTCGTGGTCGCGGCGCGCAAGGTGCTCGCCGGGGTGCTCCAGCACGTCGGCGCGGAACTCTCCGCCCGCCAGACGATCGCCGCCGAGCAGGATGTGTGGGGCTCGGTCGCGCAACTCGCCGCCGAATACGAGACCATCGCCGCCGCCGCGCAACAGCCACGGTGGGAGGCTCTGCTGCGAAGGACGCGGCTCACCGAGGCCGAGGCATCCGCAGCAATCGACTCGACCGCGTTCGGCGTGCTCAGCGCAGAGCTGCGCCGAGCCGAAGCCGACGGCTACGATGCCGAGCGCCTTCTGAGCGCTCTCGTCGCTTCTCGTCCGCTCAATGACGCGGGCGATGTGGCCGCGGTGCTCCACGAGCGGGTGATCCGCGCCCTGGAGCACACGAACGGCGCGGGGCGCGTGCGCCAGCCCGCCACGCCCATCGCCGGAGTCGTCACTCCCGCGCTCGGCCCGATGGACGACGATATGCGCAGCGCACTCCGTGAACGTGCCGCGCTCATCGAGCAGCGAGCAGATGCGCTCGTCACCGAGGCCGTCGAGTCCTCGGGGGAGTGGATCTCGGGACTCGGGATGGAACCCTCTGATCCGCAGCTCGCCGCACTTTGGCGACGCGAGGCACGCACCGTCGCGGCCTATCGCGACAAGTACGGCATCGCCGTGGCCAGGGGGCTCGGCCTTGTCGGCGATGATGCTTCGCAACGCGCAGACGCGGCACGAGCACGCGCCGCGACCCTTCGCGCGCAACAGCTCGCGGTACGCGCGGCAGAACCTGGACCGACCACCCGCAGTCTCAGGGTCGCTGGGCCGCGCCTGTAA
PROTEIN sequence
Length: 797
AKLLRAEDVPLERIARLGASVVAAVAEKRTTWSHWNLYAEAARQTMGWRFTATEDREAITGMVTDAAEQASIRLTPPELASSPAAFQRADGTSMFRPRNTARYSGAAVLAAEDRLLARSREQVAPRLADATIAHALQPHRGRTLGDDQRAALAAIASSGRVLDLLVGPAGAGKTTALRALRRAWEAEHGRGAVVGLAPSAVAAEVLAGDLGIPTENTAKWWQTHRDHGTGFTAGQLVIVDEASLAGTLALDRLVRVAADAGAKVLLVGDPAQLQSVDAGGAFGMLVADRADVPELTDVRRITAAWEKGATRDLRNGRIEAIDTYQAHGRIRAGETERMADAAYAAWQRDRALGLASILIAESSAMVTTLNRRARADLILAGQVDARAEVRLHDCTEASVGDAIITRRNDRELRTGRGWVRNGSRWTITAIGIDGSLRVRPAGRRGGATLRLPAGYVAEHVELGYAVTAYRAQGVTVDTGHTLIEPGATRENFYVAMTRGKAGNFAYVSLNRPDDDHIHPPAQDTLVVAARKVLAGVLQHVGAELSARQTIAAEQDVWGSVAQLAAEYETIAAAAQQPRWEALLRRTRLTEAEASAAIDSTAFGVLSAELRRAEADGYDAERLLSALVASRPLNDAGDVAAVLHERVIRALEHTNGAGRVRQPATPIAGVVTPALGPMDDDMRSALRERAALIEQRADALVTEAVESSGEWISGLGMEPSDPQLAALWRREARTVAAYRDKYGIAVARGLGLVGDDASQRADAARARAATLRAQQLAVRAAEPGPTTRSLRVAGPRL*