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scnpilot_p_inoc_scaffold_47830_curated_1

Organism: scnpilot_dereplicated_Microbacterium_6

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 1..1410

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.4
  • Coverage: 470.0
  • Bit_score: 900
  • Evalue 8.50e-259
rpoB; DNA-directed RNA polymerase, beta subunit/140 kD subunit; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 93.0
  • Coverage: 470.0
  • Bit_score: 864
  • Evalue 1.20e-248
DNA-directed RNA polymerase subunit beta n=2 Tax=Microbacterium RepID=H8E543_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 97.4
  • Coverage: 470.0
  • Bit_score: 900
  • Evalue 6.10e-259

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Taxonomy

Microbacterium laevaniformans → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1410
GTCGACGACATCGACAACTTCGGCAACCGTCGCATCCGCGCCGTCGGCGAGCTCATCCAGAACCAGGTCCGCACCGGTCTGTCGCGCATGGAGCGCGTCGTCCGCGAGCGCATGACCACGCAGGACATCGAGGCGATCACGCCGCAGACCCTGATCAACGTGCGCCCCGTCGTGGCTGCGATCAAGGAGTTCTTCGGCACGTCGCAGCTGTCGCAGTTCATGGACCAGAACAACCCGCTCGCGGGTCTGACCCACAAGCGTCGCCTCTCGGCGCTGGGCCCCGGCGGTCTGTCGCGTGAGCGTGCGGGCGTCGAGGTCCGTGACGTGCACCCGTCGCACTACGGCCGCATGTGCCCGATCGAGACGCCGGAAGGCCCGAACATCGGTCTGATCGGCTCGCTGGCATCCTTCGCGCGCATCAACGCGTTCGGTTTCATCGAGACGCCGTACCGTCGCGTCGAGGCCGGCAAGGTCACCGACAAGATCGACTACCTCACGGCATCCGAAGAGGTCGACTACATCGTCGCCCAGGCCGGTGCCGAGCTGAAGGCGGACGGCTCGTTCGCGACCGAGCGCGTGCTGGCCCGTCGCGGCCAGGGCGGCGAGGTCGACATGTTCCACGCCGACGAGATCGGCTACATGGACGTCTCTCCGCGCCAGATGGTGTCGGTCGGTACTTCGCTGATCCCGTTCCTCGAGCACGACGACGCGAACCGCGCCCTCATGGGTGCGAACATGCAGCGCCAGGCTGTGCCGCTGCTGCGCAGCGACTCGCCGTTCGTCGGCACGGGTATGGAGGGCTACGCCGCCATCGACGCCGGTGACGTCGTCACCGCCGAGAAGGCCGGTGTCGTCATGGAGGTCTCGGCCGACGTCGTGACCGTGCAGCTCGACGAGGGCGGCACGCAGGACTACTTCCTGCGCAAGTTCGACCGCTCGAACCAGGGCAACTCGTACAACCAGCGCGTCATCGTCTCGGCGGGCGACCGGGTCGAGGTCGGCGAGGTCATCGCCGACGGCCCCGCCACCGAGAACGGCGAGCTCGCGATCGGCAAGAACCTGCTCGTCGCGTTCATGACCTGGGAAGGCCACAACTTCGAGGATGCGATCATCCTCAGCCAGGACCTCGTCAAGAACGACACGCTCTCCTCGATCCACATTGAGGAGTACGAGGTGGATGCCCGTGACACCAAGCTCGGCAAGGAGGAGATCACCCGTGACCTCCCCAACGTCGCGCCCGACCTGCTGAAGGACCTCGACGAGCGCGGCATCGTCCGCATCGGCGCCGAGGTGCGTCCCGGCGACATCCTCGTCGGCAAGGTCACGCCCAAGGGTGAGACCGAGCTGAGCGCCGAGGAGCGCCTGCTGCGCGCGATCTTCAACGAGAAGAGCCGCGAAGTCCGTGACACC
PROTEIN sequence
Length: 470
VDDIDNFGNRRIRAVGELIQNQVRTGLSRMERVVRERMTTQDIEAITPQTLINVRPVVAAIKEFFGTSQLSQFMDQNNPLAGLTHKRRLSALGPGGLSRERAGVEVRDVHPSHYGRMCPIETPEGPNIGLIGSLASFARINAFGFIETPYRRVEAGKVTDKIDYLTASEEVDYIVAQAGAELKADGSFATERVLARRGQGGEVDMFHADEIGYMDVSPRQMVSVGTSLIPFLEHDDANRALMGANMQRQAVPLLRSDSPFVGTGMEGYAAIDAGDVVTAEKAGVVMEVSADVVTVQLDEGGTQDYFLRKFDRSNQGNSYNQRVIVSAGDRVEVGEVIADGPATENGELAIGKNLLVAFMTWEGHNFEDAIILSQDLVKNDTLSSIHIEEYEVDARDTKLGKEEITRDLPNVAPDLLKDLDERGIVRIGAEVRPGDILVGKVTPKGETELSAEERLLRAIFNEKSREVRDT