ggKbase home page

scnpilot_p_inoc_scaffold_6542_curated_6

Organism: scnpilot_dereplicated_Microbacterium_6

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 3213..3851

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta n=1 Tax=Microbacterium yannicii RepID=UPI00037A2B1B similarity UNIREF
DB: UNIREF100
  • Identity: 77.8
  • Coverage: 212.0
  • Bit_score: 343
  • Evalue 1.30e-91
DNA-directed RNA polymerase subunit beta {ECO:0000313|EMBL:KEP74554.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.8
  • Coverage: 212.0
  • Bit_score: 340
  • Evalue 2.00e-90
DNA-directed RNA polymerase, beta subunit/140 kD subunit similarity KEGG
DB: KEGG
  • Identity: 77.7
  • Coverage: 211.0
  • Bit_score: 334
  • Evalue 2.50e-89

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium sp. SUBG005 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 639
GTGAGTGACGACCCGCGGCCCTATCACAAGCCCGTCCGCAGACCTGCAGAGCTGTTCGACCGGCTGTTTGCTGCCGAAGATCCCGCAGAGGTCTCTCGCGTCGCCCACTCCACGGCGCAGGCGCTGCTCTCGCGCGTCCGTGCCAACCCCGACGATGCAGTTGTCGAGCGTTTGATCGCCTTCACTGCCGAGCACGGGATCGATGACATCGCAGAGCTGTGGTCGCGATCGCCCGCGAAGACCCTGCCCGGTGCGCTCTGGCGGCTTTACCTTGTGCAGCTCATGATCCATGACGACCCGATCACGGCGGCTTTGACCTACGAGCGGGGCCGCGCTGCCCTCGATACCGCGGACGCTCTGGTCGCCGGGGCGCCCGTGCCGGCAAGCCCTGACGAGCTCGTCACCCTCGTCGACACGATCCTGCGCGGGCTCTTCCGCGGTGACTTCGCCGTAGCTCTCGATCGCGCCGCCGCGTTCTGTCGGGTGCAGGCCGCGGGTGCCACGTACCTGGCTGACGACTACGACGCAACCGAGTCCGACCGCAGCGCAGCCTTCACCACCCGCGCGCTGCGTCTGAGTGACTACGCATCCGATCTGAGCGCCTGCGCGGCTCTCTGGCGCCGCGAATCCCTTACCTGA
PROTEIN sequence
Length: 213
VSDDPRPYHKPVRRPAELFDRLFAAEDPAEVSRVAHSTAQALLSRVRANPDDAVVERLIAFTAEHGIDDIAELWSRSPAKTLPGALWRLYLVQLMIHDDPITAALTYERGRAALDTADALVAGAPVPASPDELVTLVDTILRGLFRGDFAVALDRAAAFCRVQAAGATYLADDYDATESDRSAAFTTRALRLSDYASDLSACAALWRRESLT*