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scnpilot_p_inoc_scaffold_513_curated

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Displaying items 1-30 of 74 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_513_curated_1
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2..274
DNA (273bp) protein (91aa)
Transposase IS4 family protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E8K7_9MICO
Transposase IS4 family protein {ECO:0000313|EMBL:EIC06723.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
Transposase, IS4 family
scnpilot_p_inoc_scaffold_513_curated_2
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(743..964)
DNA (222bp) protein (74aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E9Q5_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC06338.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
scnpilot_p_inoc_scaffold_513_curated_3
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1131..1958
DNA (828bp) protein (276aa)
Formate/nitrite transporter n=2 Tax=Microbacterium RepID=H8E9Q4_9MICO
Formate/nitrite transporter {ECO:0000313|EMBL:EIC06337.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
formate/nitrite transporter family protein; K02598 nitrite transporter NirC
scnpilot_p_inoc_scaffold_513_curated_4
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2088..2780)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E9Q3_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC06336.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein
scnpilot_p_inoc_scaffold_513_curated_5
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2777..2968)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E9Q2_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC06335.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
scnpilot_p_inoc_scaffold_513_curated_6
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3129..3854
DNA (726bp) protein (242aa)
SNARE associated protein n=2 Tax=Microbacterium RepID=H8E9Q1_9MICO
SNARE associated protein {ECO:0000313|EMBL:EIC06334.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein; K03975 membrane-associated protein
scnpilot_p_inoc_scaffold_513_curated_7
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3856..4704)
DNA (849bp) protein (283aa)
Probable DNA repair protein OR221_0330 n=2 Tax=Microbacterium RepID=H8E9Q0_9MICO
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
hypothetical protein; K10979 DNA end-binding protein Ku
scnpilot_p_inoc_scaffold_513_curated_8
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4764..7184
DNA (2421bp) protein (807aa)
ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
DNA polymerase LigD, polymerase domain protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E9P9_9MICO
DNA polymerase LigD, polymerase domain protein {ECO:0000313|EMBL:EIC06332.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
scnpilot_p_inoc_scaffold_513_curated_9
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7188..8006)
DNA (819bp) protein (273aa)
Spermidine/putrescine ABC transporter permease n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E9P8_9MICO
Spermidine/putrescine ABC transporter permease {ECO:0000313|EMBL:EIC06331.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
spermidine/putrescine ABC transporter permease
scnpilot_p_inoc_scaffold_513_curated_10
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8054..8971)
DNA (918bp) protein (306aa)
Cation diffusion facilitator family transporter n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A4N0_9MICO
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:EPD84033.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
Co/Zn/Cd efflux system component; K03295 cation efflux system protein, CDF family
scnpilot_p_inoc_scaffold_513_curated_11
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(9037..9681)
DNA (645bp) protein (215aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" so
xanthosine triphosphate pyrophosphatase; K02428 dITP/XTP pyrophosphatase [EC:3.6.1.19]
Non-canonical purine NTP pyrophosphatase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3APD7_9MICO
scnpilot_p_inoc_scaffold_513_curated_12
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9678..10415)
DNA (738bp) protein (246aa)
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104188};; tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_00564}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
rph; RNase PH; K00989 ribonuclease PH [EC:2.7.7.56]
Ribonuclease PH n=2 Tax=Microbacterium RepID=H8E9P5_9MICO
scnpilot_p_inoc_scaffold_513_curated_13
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10412..11248)
DNA (837bp) protein (279aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
murI; glutamate racemase; K01776 glutamate racemase [EC:5.1.1.3]
Glutamate racemase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E9P4_9MICO
scnpilot_p_inoc_scaffold_513_curated_14
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11315..12649
DNA (1335bp) protein (445aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
nicotinic acid phosphoribosyltransferase; K00763 nicotinate phosphoribosyltransferase [EC:2.4.2.11]
Nicotinate phosphoribosyltransferase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3B618_9MICO
scnpilot_p_inoc_scaffold_513_curated_15
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12660..14471)
DNA (1812bp) protein (604aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3APD3_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD84027.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
hypothetical protein; K01992 ABC-2 type transport system permease protein
scnpilot_p_inoc_scaffold_513_curated_16
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14447..15892)
DNA (1446bp) protein (482aa)
ABC transporter related protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E879_9MICO
ABC transporter related protein {ECO:0000313|EMBL:EIC06789.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
multidrug ABC transporter ATPase; K01990 ABC-2 type transport system ATP-binding protein
scnpilot_p_inoc_scaffold_513_curated_17
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15995..16927
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ABL2_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC06790.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein
scnpilot_p_inoc_scaffold_513_curated_18
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16924..17217
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E881_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC06791.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
scnpilot_p_inoc_scaffold_513_curated_19
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17239..18528
DNA (1290bp) protein (430aa)
Aminoglycoside phosphotransferase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E882_9MICO
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:EIC06792.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein
scnpilot_p_inoc_scaffold_513_curated_20
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18625..20211)
DNA (1587bp) protein (529aa)
trypsin-like serine protease, typically periplasmic, contain C-terminal PDZ domain; K08372 putative serine protease PepD [EC:3.4.21.-]
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3APC8_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD84022.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
scnpilot_p_inoc_scaffold_513_curated_21
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20312..21529
DNA (1218bp) protein (406aa)
aspartate/tyrosine/aromatic aminotransferase; K14267 N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
Aminotransferase class I and II n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E884_9MICO
Aminotransferase class I and II {ECO:0000313|EMBL:EIC06794.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
scnpilot_p_inoc_scaffold_513_curated_22
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21510..22313)
DNA (804bp) protein (268aa)
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase n=2 Tax=Microbacterium RepID=H8E885_9MICO
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase {ECO:0000313|EMBL:EIC06795.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
amidohydrolase
scnpilot_p_inoc_scaffold_513_curated_23
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22603..23070)
DNA (468bp) protein (156aa)
Regulatory protein MarR n=2 Tax=Microbacterium RepID=H8E886_9MICO
Regulatory protein MarR {ECO:0000313|EMBL:EIC06796.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
transcriptional regulator
scnpilot_p_inoc_scaffold_513_curated_24
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23144..23692
DNA (549bp) protein (183aa)
Isopentenyl-diphosphate Delta-isomerase {ECO:0000256|HAMAP-Rule:MF_00202, ECO:0000256|SAAS:SAAS00231155}; Short=IPP isomerase {ECO:0000256|HAMAP-Rule:MF_00202};; EC=5.3.3.2 {ECO:0000256|HAMAP-Rule:MF_00202};; IPP:DMAPP isomerase {ECO:0000256|HAMAP-Rule:MF_00202}; Isopentenyl pyrophosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00202}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
idi; isopentenyldiphosphate isomerase; K01823 isopentenyl-diphosphate delta-isomerase [EC:5.3.3.2]
Isopentenyl-diphosphate Delta-isomerase n=2 Tax=Microbacterium RepID=H8E887_9MICO
scnpilot_p_inoc_scaffold_513_curated_25
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23689..24756
DNA (1068bp) protein (356aa)
geranylgeranyl pyrophosphate synthase; K13789 geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
Polyprenyl synthetase n=2 Tax=Microbacterium RepID=H8E888_9MICO
Polyprenyl synthetase {ECO:0000313|EMBL:EIC06798.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
scnpilot_p_inoc_scaffold_513_curated_26
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24753..25607
DNA (855bp) protein (285aa)
Squalene/phytoene synthase n=2 Tax=Microbacterium RepID=H8E889_9MICO
Squalene/phytoene synthase {ECO:0000313|EMBL:EIC06799.1}; Flags: Precursor;; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
phytoene/squalene synthetase
scnpilot_p_inoc_scaffold_513_curated_27
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25604..27199
DNA (1596bp) protein (532aa)
Phytoene desaturase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ABK3_9MICO
Phytoene desaturase {ECO:0000313|EMBL:EPD84015.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
phytoene dehydrogenase
scnpilot_p_inoc_scaffold_513_curated_28
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27201..27560
DNA (360bp) protein (120aa)
Lycopene cyclase domain-containing protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3B605_9MICO
Lycopene cyclase {ECO:0000313|EMBL:EXJ51555.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_513_curated_29
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27557..27901
DNA (345bp) protein (115aa)
Lycopene cyclase domain protein n=2 Tax=Microbacterium RepID=H8E892_9MICO
Lycopene cyclase domain protein {ECO:0000313|EMBL:EIC06802.1}; Flags: Precursor;; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein
scnpilot_p_inoc_scaffold_513_curated_30
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27898..28770
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3APB9_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD84012.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
ubiA; 4-hydroxybenzoate polyprenyltransferase
Displaying items 1-30 of 74 in total

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