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scnpilot_p_inoc_scaffold_852_curated

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_852_curated_1

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1..636
DNA (636bp) protein (212aa)
Integrase catalytic region n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E4N3_9MICO
Transposase {ECO:0000313|EMBL:AHF25566.1}; TaxID=1393643 species="Bacteria; environmental samples.;" source="uncultured bacterium Contigcl_10-cl.;"
transposase
scnpilot_p_inoc_scaffold_852_curated_2
unknown

Not on your lists

633..731
DNA (99bp) protein (33aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_852_curated_3
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1875..2543
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E7U5_9MICO
Calcium-binding protein {ECO:0000313|EMBL:KDA04634.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
hypothetical protein
scnpilot_p_inoc_scaffold_852_curated_4
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2558..2965
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E7U4_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KDA04644.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
scnpilot_p_inoc_scaffold_852_curated_5
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2979..4247
DNA (1269bp) protein (423aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E721_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC07274.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
scnpilot_p_inoc_scaffold_852_curated_6
unknown

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comp(4404..4742)
DNA (339bp) protein (113aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_852_curated_7
unknown

Not on your lists

comp(4860..5777)
DNA (918bp) protein (306aa)
hypothetical protein n=1 Tax=Microbacterium paraoxydans RepID=UPI000380E0CB
scnpilot_p_inoc_scaffold_852_curated_8
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5889..7136)
DNA (1248bp) protein (416aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AC78_9MICO
Putative NreB protein {ECO:0000313|EMBL:CDK00119.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
major facilitator transporter
scnpilot_p_inoc_scaffold_852_curated_9
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7133..7513)
DNA (381bp) protein (127aa)
ArsR family transcriptional regulator n=1 Tax=Arthrobacter sp. 131MFCol6.1 RepID=UPI000371BE91
HTH-type transcriptional regulator KmtR {ECO:0000313|EMBL:KJL32296.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
ArsR family transcriptional regulator
scnpilot_p_inoc_scaffold_852_curated_10
Corynebacterium glyciniphilum, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7563..8168)
DNA (606bp) protein (202aa)
Tetracyclin repressor domain protein n=21 Tax=Mycobacterium abscessus RepID=R4UD36_MYCAB
Transcriptional regulator, TetR-family {ECO:0000313|EMBL:AHW63576.1}; TaxID=1404245 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium glyciniphilum AJ 3170.;"
tetracyclin repressor domain protein
scnpilot_p_inoc_scaffold_852_curated_11
Leucobacter sp. UCD-THU, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8262..9203
DNA (942bp) protein (314aa)
Cobalt-zinc-cadmium resistance protein CzcD n=1 Tax=Kocuria palustris PEL RepID=M2XD70_9MICC
Cation transporter {ECO:0000313|EMBL:EYT55080.1}; TaxID=1292023 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter sp. UCD-THU.;"
putative cobalt-zinc-cadmium efflux protein; K03295 cation efflux system protein, CDF family
scnpilot_p_inoc_scaffold_852_curated_12
Actinomyces massiliensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9218..9910)
DNA (693bp) protein (231aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=1 Tax=Actinomyces massiliensis F0489 RepID=J0XCE4_9ACTO
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EJF46366.1}; TaxID=1125718 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces massiliensis F0489.;"
short chain alcohol dehydrogenase
scnpilot_p_inoc_scaffold_852_curated_13
Kocuria palustris, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9935..10267)
DNA (333bp) protein (111aa)
4Fe-4S ferredoxin, iron-sulfur binding protein n=1 Tax=Kocuria palustris PEL RepID=M2WEP8_9MICC
4Fe-4S ferredoxin, iron-sulfur binding protein {ECO:0000313|EMBL:EME37002.1}; TaxID=1236550 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria palustris PEL.;"
ferredoxin
scnpilot_p_inoc_scaffold_852_curated_14
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10277..12175)
DNA (1899bp) protein (633aa)
Multicopper oxidase type 3 n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E3G6_9MICO
Multicopper oxidase {ECO:0000313|EMBL:EXJ52410.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
multicopper oxidase type 3
scnpilot_p_inoc_scaffold_852_curated_15
unknown

Not on your lists

12338..12709
DNA (372bp) protein (124aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_852_curated_16
Leucobacter sp. UCD-THU, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12794..13411
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0003100C57
Uncharacterized protein {ECO:0000313|EMBL:EYT51768.1}; TaxID=1292023 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter sp. UCD-THU.;"
hypothetical protein
scnpilot_p_inoc_scaffold_852_curated_17
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13470..14303
DNA (834bp) protein (278aa)
glycosyl hydrolase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034AC5C9
Uncharacterized protein {ECO:0000313|EMBL:EQM74721.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
hypothetical protein
scnpilot_p_inoc_scaffold_852_curated_18
Leucobacter komagatae, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14466..14780)
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036FF033
Leucobacter komagatae strain VKM ST2845 L_komagatae_18, whole genome shotgun sequence {ECO:0000313|EMBL:KIP51985.1}; TaxID=55969 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter komagatae.;"
hypothetical protein
scnpilot_p_inoc_scaffold_852_curated_19
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(14796..16976)
DNA (2181bp) protein (727aa)
copper-translocating P-type ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4]
Lead, cadmium, zinc and mercury transporting ATPase Copper-translocating P-type ATPase n=1 Tax=Kocuria palustris PEL RepID=M2YEI7_9MICC
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_p_inoc_scaffold_852_curated_20
Kocuria palustris, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17002..18195)
DNA (1194bp) protein (398aa)
Ferredoxin reductase n=1 Tax=Kocuria palustris PEL RepID=M2YEP1_9MICC
Ferredoxin reductase {ECO:0000313|EMBL:EME37000.1}; TaxID=1236550 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria palustris PEL.;"
FAD-dependent pyridine nucleotide-disulphide oxidoreductase
scnpilot_p_inoc_scaffold_852_curated_21
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18252..18464)
DNA (213bp) protein (71aa)
YHS domain-containing protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E3F9_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ52417.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_852_curated_22
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18606..20126)
DNA (1521bp) protein (507aa)
Putative multicopper oxidase n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XPV5_MICPN
putative multicopper oxidase
Putative multicopper oxidase {ECO:0000313|EMBL:BAK36786.1}; TaxID=1032480 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
scnpilot_p_inoc_scaffold_852_curated_23
Kocuria palustris, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20123..21292)
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Kocuria palustris PEL RepID=M2XD63_9MICC
Uncharacterized protein {ECO:0000313|EMBL:EME37001.1}; TaxID=1236550 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria palustris PEL.;"
major facilitator superfamily protein
scnpilot_p_inoc_scaffold_852_curated_24
Knoellia aerolata, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21307..22191)
DNA (885bp) protein (295aa)
transposase IS401 n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI0003602B30
Integrase {ECO:0000313|EMBL:KGN35085.1}; Flags: Fragment;; TaxID=1385519 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia aerolata DSM 18566.;"
integrase catalytic subunit
scnpilot_p_inoc_scaffold_852_curated_25
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22245..22526)
DNA (282bp) protein (94aa)
Transposase IS3/IS911 family protein n=1 Tax=Segniliparus rotundus (strain ATCC BAA-972 / CDC 1076 / CIP 108378 / DSM 44985 / JCM 13578) RepID=D6ZAT7_SEGRD
Uncharacterized protein {ECO:0000313|EMBL:CDK00390.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
transposase IS3/IS911 family protein
scnpilot_p_inoc_scaffold_852_curated_26
Kocuria palustris, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22775..23065)
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Leucobacter chromiiresistens RepID=UPI000262A32C
Uncharacterized protein {ECO:0000313|EMBL:EME36999.1}; TaxID=1236550 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria palustris PEL.;"
hypothetical protein
scnpilot_p_inoc_scaffold_852_curated_27
Leucobacter komagatae, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23121..23363)
DNA (243bp) protein (81aa)
Phenol hydroxylase n=2 Tax=Actinomycetales RepID=A7LBL1_9ACTO
Leucobacter komagatae strain VKM ST2845 L_komagatae_18, whole genome shotgun sequence {ECO:0000313|EMBL:KIP51983.1}; TaxID=55969 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter komagatae.;"
YHS domain-containing protein
scnpilot_p_inoc_scaffold_852_curated_28
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23416..25692)
DNA (2277bp) protein (759aa)
copA; putative copper-transporting ATPase CopA (EC:3.6.3.4); K01533 Cu2+-exporting ATPase [EC:3.6.3.4]
carbonate dehydratase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000360110F
Carbonate dehydratase {ECO:0000313|EMBL:EYT60473.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
scnpilot_p_inoc_scaffold_852_curated_29
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25728..26690)
DNA (963bp) protein (321aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034A8262
Uncharacterized protein {ECO:0000313|EMBL:EYT60472.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
hypothetical protein
scnpilot_p_inoc_scaffold_852_curated_30
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26690..26899)
DNA (210bp) protein (70aa)
Heavy metal-associated domain protein n=1 Tax=Dermacoccus sp. Ellin185 RepID=E3B9B3_9MICO
Heavy metal transporter {ECO:0000313|EMBL:KDA04922.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
heavy metal transport/detoxification protein
Displaying items 1-30 of 50 in total

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