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scnpilot_p_inoc_scaffold_1511_curated

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1511_curated_1
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..894)
DNA (894bp) protein (298aa)
atpG; F0F1-type ATP synthase, gamma subunit; K02115 F-type H+-transporting ATPase subunit gamma [EC:3.6.3.14]
ATP synthase gamma chain n=2 Tax=Microbacterium RepID=H8E220_9MICO
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
scnpilot_p_inoc_scaffold_1511_curated_2
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(924..2564)
DNA (1641bp) protein (547aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
atpA; F0F1-type ATP synthase, alpha subunit; K02111 F-type H+-transporting ATPase subunit alpha [EC:3.6.3.14]
ATP synthase subunit alpha n=2 Tax=Microbacterium RepID=H8E219_9MICO
scnpilot_p_inoc_scaffold_1511_curated_3
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(2580..3368)
DNA (789bp) protein (263aa)
F0F1-type ATP synthase, delta subunit; K02113 F-type H+-transporting ATPase subunit delta [EC:3.6.3.14]
ATP synthase subunit delta n=2 Tax=Microbacterium RepID=H8E218_9MICO
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
scnpilot_p_inoc_scaffold_1511_curated_4
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3368..3904)
DNA (537bp) protein (179aa)
atpF; F0F1-type ATP synthase, subunit B; K02109 F-type H+-transporting ATPase subunit b [EC:3.6.3.14]
ATP synthase subunit b n=2 Tax=Microbacterium RepID=H8E217_9MICO
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
scnpilot_p_inoc_scaffold_1511_curated_5
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3934..4167)
DNA (234bp) protein (78aa)
ATP synthase subunit c n=2 Tax=Microbacterium RepID=H8E216_9MICO
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242779}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
ATP synthase, C chain
scnpilot_p_inoc_scaffold_1511_curated_6
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4217..5086)
DNA (870bp) protein (290aa)
atpB; F0F1-type ATP synthase, subunit A; K02108 F-type H+-transporting ATPase subunit a [EC:3.6.3.14]
ATP synthase subunit a n=2 Tax=Microbacterium RepID=H8E215_9MICO
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
scnpilot_p_inoc_scaffold_1511_curated_7
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5132..5668)
DNA (537bp) protein (179aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E214_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ52562.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1511_curated_8
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5665..6846)
DNA (1182bp) protein (394aa)
Glycosyl transferase, family 4, conserved region-containing protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E213_9MICO
UDP-N-acetylmuramyl pentapeptide phosphotransferase {ECO:0000313|EMBL:EXJ52561.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase
scnpilot_p_inoc_scaffold_1511_curated_9
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6843..7538)
DNA (696bp) protein (232aa)
Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E212_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ52560.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
translation factor (SUA5)
scnpilot_p_inoc_scaffold_1511_curated_10
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7592..8473)
DNA (882bp) protein (294aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microba
hemK; methylase of polypeptide chain release factors; K02493 release factor glutamine methyltransferase [EC:2.1.1.-]
Release factor glutamine methyltransferase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AX59_9MICO
scnpilot_p_inoc_scaffold_1511_curated_11
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8652..9590
DNA (939bp) protein (313aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
cysteine synthase; K01738 cysteine synthase A [EC:2.5.1.47]
Cysteine synthase A n=2 Tax=Microbacterium RepID=H8E210_9MICO
scnpilot_p_inoc_scaffold_1511_curated_12
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9599..10204
DNA (606bp) protein (202aa)
Serine acetyltransferase {ECO:0000256|PIRNR:PIRNR000441}; EC=2.3.1.30 {ECO:0000256|PIRNR:PIRNR000441};; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
serine acetyltransferase; K00640 serine O-acetyltransferase [EC:2.3.1.30]
Serine acetyltransferase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E209_9MICO
scnpilot_p_inoc_scaffold_1511_curated_13
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10451..10771)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AIM3_9MICO
Membrane protein {ECO:0000313|EMBL:EXJ52556.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1511_curated_14
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10817..11893)
DNA (1077bp) protein (359aa)
Peptide chain release factor 1 n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E207_9MICO
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
prfA; protein chain release factor A; K02835 peptide chain release factor 1
scnpilot_p_inoc_scaffold_1511_curated_15
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11905..13959)
DNA (2055bp) protein (685aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
Transcription termination factor Rho n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E206_9MICO
rho; transcription termination factor; K03628 transcription termination factor Rho
scnpilot_p_inoc_scaffold_1511_curated_16
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14125..15069)
DNA (945bp) protein (315aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00080104}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832};; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
thrB; homoserine kinase; K00872 homoserine kinase [EC:2.7.1.39]
Homoserine kinase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ABY2_9MICO
scnpilot_p_inoc_scaffold_1511_curated_17
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15066..16136)
DNA (1071bp) protein (357aa)
Threonine synthase {ECO:0000256|PIRNR:PIRNR038945}; EC=4.2.3.1 {ECO:0000256|PIRNR:PIRNR038945};; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
thrC; threonine synthase; K01733 threonine synthase [EC:4.2.3.1]
Threonine synthase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3BDB8_9MICO
scnpilot_p_inoc_scaffold_1511_curated_18
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16172..17524)
DNA (1353bp) protein (451aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
homoserine dehydrogenase; K00003 homoserine dehydrogenase [EC:1.1.1.3]
Homoserine dehydrogenase n=2 Tax=Microbacterium RepID=H8E203_9MICO
scnpilot_p_inoc_scaffold_1511_curated_19
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17521..18969)
DNA (1449bp) protein (483aa)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
lysA; diaminopimelate decarboxylase; K01586 diaminopimelate decarboxylase [EC:4.1.1.20]
Diaminopimelate decarboxylase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AEC9_9MICO
scnpilot_p_inoc_scaffold_1511_curated_20
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19092..19931)
DNA (840bp) protein (280aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E201_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ52576.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1511_curated_21
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(19933..21600)
DNA (1668bp) protein (556aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
argS; arginyl-tRNA synthetase; K01887 arginyl-tRNA synthetase [EC:6.1.1.19]
Arginine--tRNA ligase n=2 Tax=Microbacterium RepID=H8E200_9MICO
scnpilot_p_inoc_scaffold_1511_curated_22
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21698..22582)
DNA (885bp) protein (295aa)
Transglutaminase domain-containing protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1Z9_9MICO
Transglutaminase domain-containing protein {ECO:0000313|EMBL:EIC09169.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
transglutaminase-like enzyme, cysteine protease
Displaying 22 items

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