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scnpilot_p_inoc_scaffold_1511_curated_15

Organism: scnpilot_dereplicated_Microbacterium_7

near complete RP 45 / 55 MC: 4 BSCG 45 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(11905..13959)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.1
  • Coverage: 691.0
  • Bit_score: 1240
  • Evalue 0.0
Transcription termination factor Rho n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E206_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 93.8
  • Coverage: 693.0
  • Bit_score: 1205
  • Evalue 0.0
rho; transcription termination factor; K03628 transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 67.8
  • Coverage: 734.0
  • Bit_score: 840
  • Evalue 3.40e-241

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Taxonomy

Microbacterium sp. MRS-1 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2055
GTGGAGTCCCTCTCCGAGATCCAGACCGAGAACACCGAGAACGTCGAGAGCGCGCAAGCCACCGGCGTCGAGGAGAACACCGCCGAGGCGACCCCGGTCGCCGAGAGCACCGAGACCGCTGAGGTCGAGGCTCCCGCCGAGGAGTCCGCCGCCGCTGCCGCCGAGGCCGTTCAGACCGAGGCCCCCGACGTGGAGGTGCCGTCGGATGCCGAGGCTCCCGCCGCCGCCGAGGTCGAGCCCGCCCCCGTGGAGGCTGAGCCCGCCCCCGTGGAGGCTGAGCCCGCTGCGGCGGAGGCGGCGCCGGTCGTTCCCGAGGAGAAGCCAGCGAAGGCTCCCCGCAAGCGTGCGCCGCGCCGCGCGAAGAGCGCCGACGTCGCGCCCGCTGAGGATGCCGCCACGGACGCGGTGACCGAGACCGCTGCCGCCGCGCAGGACCCGGCAGAGTCCGCCGCTTCGACGCCGACGGCGGCCGACGAGACCCCCGCGGCCGAGGCTGCGGCCGAGACTCCTGCCGCCGACGCCGCCGAGACCGCCGCCGACGCCGCCGAGACCGCCGCCACCGGCGACGCGTCGGGTGCCGAAACGACGGACAGCGCCGCGGCAGACGCGGCAGGCGCCGCCGAGGGCGAGACCCCCAGCCGCAGCCGCTCGCGCAGCCGCAGCCGCAGCCGCAACCGCGGTCAGCGCGGCGAGAACGGCCAGAACGCTCAGGGTGCGCAGAACGCCCAGAACAACGCTCCGGCCGCTCCGGCCGCCGAAGAGAGCGCAGACGGCGACGACGAGCAGGCCCAGGGCCGCGGTCGCCAGCGCAACAAGCGTCGGGGCCCGGCGCAGAACGGCGACGAGTTCGAAACCGAGATCGGCGAGGACGACGTCCTCATCCCGATCGCCGGCATCCTCGACGTCCTCGACAACTACGCTTTCGTGCGCACCACCGGCTACCTGCCGGGGGCGAGCGACGTCTACGTGTCGCTCGGCCAGGTCAAGAAGTACAACCTGCGCAAGGGCGACGCCGTCGTCGGCGCCATCAAGCAGCCGCGCGAGGGCGAGCAGTCCAGCCGCCAGAAGTACAACGCGCTGGTCAAGGTCGACGCCATCAACGGGCTGTCGGTCGACGACGCCGCCGAGCGTGTCGAGTTCGGTAAGCTCACCCCGCTCTACCCGCAGGAGCGCCTGCGCCTGGAGACGGCGCCGGAGAAGCTCACGCAGCGCATCATCGACCTCGTCGCGCCCATCGGAAAGGGCCAGCGCGGCCTCATCGTCGCGCCGCCCAAGGCCGGCAAGACGATCGTGCTGCAGCAGATCGCCAACGCGATCGCGACGAACAACCCCGAGGTCCACCTCATGGTCGTGCTCGTCGACGAGCGTCCCGAAGAGGTCACCGACATGCAGCGGACCGTCAAGGGTGAGGTCATCGCCTCCACCTTCGACCGTCCCGCCGAAGACCACACCACGGTCGCGGAGCTGGCCATCGAGCGCGCGAAGCGCCTCGTCGAGCTCGGCCGCGATGTCGTCGTGCTCCTCGACTCGATCACGCGCCTGGGCCGCGCGTACAACATCTCTGCACCCACGAGCGGCCGCGTGCTCAGCGGCGGCGTCGACGCGTCGGCGCTGTACCCGCCCAAGCGCTTCTTCGGGGCAGCCCGCAACATCGAGAACGGCGGCTCGCTGACCATTCTCGCCACGGCGCTCGTGGAGACCGGCTCGAAGATGGACGAGGTCATCTTTGAGGAGTTCAAGGGCACCGGCAACAGCGAGCTGCGCCTGTCGCGCCAGCTGGCCGACAAGCGGATCTTCCCGGCCGTCGACGTCAACGCGTCCTCGACCCGCCGCGAGGAGATGCTGCTGAACCCCGATGAGGTGAAGATCACCTGGAAGCTGCGTCGCGCCCTCGCCGGCCTCGACCCGCAGCAGGCCCTCGAGGTGGTGCTCGGCAAGCTCAAGGAGACGAGCTCCAACGTCGAGTTCCTCTACCAGATGCAGAACGTGCAGATGAAGTCGGTGTCCACGGCCGGCGGCGGCCACAGCCACGGGCACGAGAACAGCATCCGCTGA
PROTEIN sequence
Length: 685
VESLSEIQTENTENVESAQATGVEENTAEATPVAESTETAEVEAPAEESAAAAAEAVQTEAPDVEVPSDAEAPAAAEVEPAPVEAEPAPVEAEPAAAEAAPVVPEEKPAKAPRKRAPRRAKSADVAPAEDAATDAVTETAAAAQDPAESAASTPTAADETPAAEAAAETPAADAAETAADAAETAATGDASGAETTDSAAADAAGAAEGETPSRSRSRSRSRSRNRGQRGENGQNAQGAQNAQNNAPAAPAAEESADGDDEQAQGRGRQRNKRRGPAQNGDEFETEIGEDDVLIPIAGILDVLDNYAFVRTTGYLPGASDVYVSLGQVKKYNLRKGDAVVGAIKQPREGEQSSRQKYNALVKVDAINGLSVDDAAERVEFGKLTPLYPQERLRLETAPEKLTQRIIDLVAPIGKGQRGLIVAPPKAGKTIVLQQIANAIATNNPEVHLMVVLVDERPEEVTDMQRTVKGEVIASTFDRPAEDHTTVAELAIERAKRLVELGRDVVVLLDSITRLGRAYNISAPTSGRVLSGGVDASALYPPKRFFGAARNIENGGSLTILATALVETGSKMDEVIFEEFKGTGNSELRLSRQLADKRIFPAVDVNASSTRREEMLLNPDEVKITWKLRRALAGLDPQQALEVVLGKLKETSSNVEFLYQMQNVQMKSVSTAGGGHSHGHENSIR*