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scnpilot_p_inoc_scaffold_2300_curated

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2300_curated_1
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3..722)
DNA (720bp) protein (240aa)
glycerate kinase (EC:2.7.1.31); K00865 glycerate kinase [EC:2.7.1.31]
Glycerate kinase n=2 Tax=Microbacterium RepID=H8E0T7_9MICO
Glycerate kinase {ECO:0000313|EMBL:EPD84707.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
scnpilot_p_inoc_scaffold_2300_curated_2
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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791..1768
DNA (978bp) protein (326aa)
exoB; UDP-glucose 4-epimerase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] rbh
UDP-glucose 4-epimerase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E0T8_9MICO
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EXJ51367.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
scnpilot_p_inoc_scaffold_2300_curated_3
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1908..2195)
DNA (288bp) protein (96aa)
Alpha-L-arabinofuranosidase domain protein n=2 Tax=Microbacterium RepID=H8E0T9_9MICO
Alpha-L-arabinofuranosidase domain protein {ECO:0000313|EMBL:EIC09340.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
scnpilot_p_inoc_scaffold_2300_curated_4
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2384..3394)
DNA (1011bp) protein (337aa)
Regulatory protein LacI n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E0U0_9MICO
Regulatory protein LacI {ECO:0000313|EMBL:EIC09341.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
transcriptional regulator
scnpilot_p_inoc_scaffold_2300_curated_5
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3450..4646
DNA (1197bp) protein (399aa)
Galactose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU000506}; EC=2.7.7.12 {ECO:0000256|RuleBase:RU000506};; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
galactose-1-phosphate uridylyltransferase; K00965 UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
Galactose-1-phosphate uridylyltransferase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E0U1_9MICO
scnpilot_p_inoc_scaffold_2300_curated_6
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4643..5842
DNA (1200bp) protein (400aa)
galactokinase; K00849 galactokinase [EC:2.7.1.6]
Galactokinase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E0U2_9MICO
Galactokinase {ECO:0000256|SAAS:SAAS00025843}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
scnpilot_p_inoc_scaffold_2300_curated_7
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5889..5993
DNA (105bp) protein (35aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E0U3_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC09344.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
scnpilot_p_inoc_scaffold_2300_curated_8
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6008..6652
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E0U4_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ51371.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2300_curated_9
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6625..6906)
DNA (282bp) protein (94aa)
Carboxylic ester hydrolase; EC=3.1.1.-;; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
carboxylesterase type B; K03929 para-nitrobenzyl esterase [EC:3.1.1.-]
Carboxylesterase type B n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E0U5_9MICO
scnpilot_p_inoc_scaffold_2300_curated_10
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7597..8490)
DNA (894bp) protein (298aa)
DNA methylase N-4/N-6 domain protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E0U6_9MICO
DNA modification methyltransferase {ECO:0000313|EMBL:EXJ51372.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
DNA methyltransferase
scnpilot_p_inoc_scaffold_2300_curated_11
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8487..9536)
DNA (1050bp) protein (350aa)
lipoate-protein ligase A; K03800 lipoate-protein ligase A [EC:2.7.7.63]
Biotin/lipoate A/B protein ligase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E0U7_9MICO
Lipoate--protein ligase {ECO:0000313|EMBL:KIC58182.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
scnpilot_p_inoc_scaffold_2300_curated_12
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9634..11157
DNA (1524bp) protein (508aa)
UPI0003C7F97B related cluster n=1 Tax=unknown RepID=UPI0003C7F97B
Ig family protein {ECO:0000313|EMBL:EHQ25599.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2300_curated_13
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11020..11994)
DNA (975bp) protein (325aa)
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N768_MICTS
Uncharacterized protein {ECO:0000313|EMBL:KIC58151.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
scnpilot_p_inoc_scaffold_2300_curated_14
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11998..12708)
DNA (711bp) protein (237aa)
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N768_MICTS
Uncharacterized protein {ECO:0000313|EMBL:KIC58151.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
scnpilot_p_inoc_scaffold_2300_curated_15
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12862..13743)
DNA (882bp) protein (294aa)
Alpha/beta hydrolase fold containing protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E0U8_9MICO
Lysophospholipase {ECO:0000313|EMBL:KIC58150.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
lysophospholipase
scnpilot_p_inoc_scaffold_2300_curated_16
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13803..15422
DNA (1620bp) protein (540aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E0U9_9MICO
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:EIC09350.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
permease of the major facilitator superfamily
scnpilot_p_inoc_scaffold_2300_curated_17
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15488..15937
DNA (450bp) protein (150aa)
Regulatory protein MarR n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E0V0_9MICO
Regulatory protein MarR {ECO:0000313|EMBL:EIC09351.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
transcriptional regulator
scnpilot_p_inoc_scaffold_2300_curated_18
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15934..17286
DNA (1353bp) protein (451aa)
Major facilitator superfamily MFS_1 n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E0V1_9MICO
MFS transporter {ECO:0000313|EMBL:EXJ51377.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
permease of the major facilitator superfamily
scnpilot_p_inoc_scaffold_2300_curated_19
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17469..18890
DNA (1422bp) protein (474aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ARF6_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD84692.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
hypothetical protein
Displaying 19 items

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