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scnpilot_p_inoc_scaffold_2624_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2624_curated_1
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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510..1406
DNA (897bp) protein (299aa)
Tyrosine recombinase XerC n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A987_9MICO
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
integrase; K03733 integrase/recombinase XerC
scnpilot_p_inoc_scaffold_2624_curated_2
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1523..2107)
DNA (585bp) protein (195aa)
Peptidase M23 n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E4G6_9MICO
Peptidase M23 {ECO:0000313|EMBL:EXJ52745.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2624_curated_3
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2395..3264
DNA (870bp) protein (290aa)
30S ribosomal protein S2 n=2 Tax=Microbacterium RepID=H8E4G7_9MICO
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
rpsB; ribosomal protein S2; K02967 small subunit ribosomal protein S2
scnpilot_p_inoc_scaffold_2624_curated_4
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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3354..4181
DNA (828bp) protein (276aa)
Elongation factor Ts n=2 Tax=Microbacterium RepID=H8E4G8_9MICO
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
tsf; translation elongation factor Ts; K02357 elongation factor Ts
scnpilot_p_inoc_scaffold_2624_curated_5
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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4272..4991
DNA (720bp) protein (240aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
pyrH; uridylate kinase; K09903 uridylate kinase [EC:2.7.4.22]
Uridylate kinase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3B3K5_9MICO
scnpilot_p_inoc_scaffold_2624_curated_6
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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5049..5603
DNA (555bp) protein (185aa)
Ribosome-recycling factor n=2 Tax=Microbacterium RepID=H8E4H0_9MICO
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
frr; ribosome recycling factor; K02838 ribosome recycling factor
scnpilot_p_inoc_scaffold_2624_curated_7
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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5608..6630
DNA (1023bp) protein (341aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
CDP-diglyceride synthetase; K00981 phosphatidate cytidylyltransferase [EC:2.7.7.41]
Phosphatidate cytidylyltransferase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E4H1_9MICO
scnpilot_p_inoc_scaffold_2624_curated_8
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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6627..7193
DNA (567bp) protein (189aa)
DivIVA domain repeat protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E4H2_9MICO
DivIVA domain repeat protein {ECO:0000313|EMBL:EIC08221.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
permease of the major facilitator superfamily
scnpilot_p_inoc_scaffold_2624_curated_9
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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7377..7979
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A254_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD83118.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
secreted protein
scnpilot_p_inoc_scaffold_2624_curated_10
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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7984..8265
DNA (282bp) protein (94aa)
ATP/GTP-binding protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E4H4_9MICO
ATP/GTP-binding protein {ECO:0000313|EMBL:EIC08223.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
ATP/GTP-binding protein
scnpilot_p_inoc_scaffold_2624_curated_11
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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8267..8980
DNA (714bp) protein (238aa)
Hydrolase of the alpha/beta superfamily n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E4H5_9MICO
Hydrolase of the alpha/beta superfamily {ECO:0000313|EMBL:EIC08224.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hydrolase of the alpha/beta superfamily; K07018
scnpilot_p_inoc_scaffold_2624_curated_12
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(8984..10135)
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E4H6_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC08225.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
permease
scnpilot_p_inoc_scaffold_2624_curated_13
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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10231..11988
DNA (1758bp) protein (586aa)
Glycosyltransferase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E4H7_9MICO
Glycosyltransferase {ECO:0000313|EMBL:EIC08226.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
glycosyltransferase
Displaying 13 items

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