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scnpilot_p_inoc_scaffold_1128_curated

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1128_curated_1
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..276)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A3B9_9MICO
FAD-binding dehydrogenase {ECO:0000313|EMBL:EXJ52787.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
putative FAD-binding dehydrogenase; K07077
scnpilot_p_inoc_scaffold_1128_curated_2
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(315..773)
DNA (459bp) protein (153aa)
Globin n=2 Tax=Microbacterium RepID=H8E4L0_9MICO
Globin {ECO:0000313|EMBL:EIC08259.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
glbO; hypothetical protein; K06886 hemoglobin
scnpilot_p_inoc_scaffold_1128_curated_3
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(770..958)
DNA (189bp) protein (63aa)
MscS Mechanosensitive ion channel n=2 Tax=Microbacterium RepID=H8E4L1_9MICO
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:EIC08260.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
scnpilot_p_inoc_scaffold_1128_curated_4
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1926..2291)
DNA (366bp) protein (122aa)
Response regulator receiver n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E4L2_9MICO
Response regulator receiver {ECO:0000313|EMBL:EIC08261.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
scnpilot_p_inoc_scaffold_1128_curated_5
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(2303..3154)
DNA (852bp) protein (284aa)
Histidine kinase dimerization and phosphoacceptor region n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E4L3_9MICO
Histidine kinase dimerization and phosphoacceptor region {ECO:0000313|EMBL:EIC08262.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
putative two-component system sensor kinase
scnpilot_p_inoc_scaffold_1128_curated_6
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3190..4005)
DNA (816bp) protein (272aa)
Putative integral membrane transport protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E4L4_9MICO
Putative integral membrane transport protein {ECO:0000313|EMBL:EIC08263.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
integral membrane transport protein
scnpilot_p_inoc_scaffold_1128_curated_7
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(4002..4913)
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ALY2_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD83197.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
ABC transporter-like protein; K09687 antibiotic transport system ATP-binding protein
scnpilot_p_inoc_scaffold_1128_curated_8
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5024..7570)
DNA (2547bp) protein (849aa)
pepN; aminopeptidase N; K01256 aminopeptidase N [EC:3.4.11.2]
Aminopeptidase N n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E4L6_9MICO
Aminopeptidase N {ECO:0000313|EMBL:EIC08265.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
scnpilot_p_inoc_scaffold_1128_curated_9
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(7645..9291)
DNA (1647bp) protein (549aa)
Sulfate transporter n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E4L7_9MICO
MFS transporter {ECO:0000313|EMBL:EXJ52794.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
sulfate permease-like transporter, MFS superfamily; K03321 sulfate permease, SulP family
scnpilot_p_inoc_scaffold_1128_curated_10
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9288..9656)
DNA (369bp) protein (123aa)
Regulatory protein ArsR n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E4L8_9MICO
Regulatory protein ArsR {ECO:0000313|EMBL:EIC08267.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
transcriptional regulator, ArsR family; K03892 ArsR family transcriptional regulator
scnpilot_p_inoc_scaffold_1128_curated_11
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9725..10267
DNA (543bp) protein (181aa)
Ribose 5-phosphate isomerase {ECO:0000313|EMBL:EXJ52796.1}; EC=5.3.1.6 {ECO:0000313|EMBL:EXJ52796.1};; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
ribose 5-phosphate isomerase RpiB; K01808 ribose 5-phosphate isomerase B [EC:5.3.1.6]
Ribose 5-phosphate isomerase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E4L9_9MICO
scnpilot_p_inoc_scaffold_1128_curated_12
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10267..11265
DNA (999bp) protein (333aa)
formamidopyrimidine-DNA glycosylase; K05522 endonuclease VIII [EC:3.2.2.- 4.2.99.18]
DNA glycosylase/AP lyase, H2TH DNA-binding protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E4M0_9MICO
DNA glycosylase/AP lyase, H2TH DNA-binding protein {ECO:0000313|EMBL:EIC08269.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
scnpilot_p_inoc_scaffold_1128_curated_13
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11273..11980
DNA (708bp) protein (236aa)
Negative transcriptional regulator n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E4M1_9MICO
Transcriptional regulator {ECO:0000313|EMBL:KIC56101.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
transcriptional regulator; K07734 transcriptional regulator
scnpilot_p_inoc_scaffold_1128_curated_14
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11977..13482
DNA (1506bp) protein (502aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3B3W2_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD83204.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
metal-dependent hydrolase with the TIM-barrel fold; K07047
scnpilot_p_inoc_scaffold_1128_curated_15
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13543..14028)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A9K6_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD83205.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
DNA-binding ferritin-like protein; K04047 starvation-inducible DNA-binding protein
scnpilot_p_inoc_scaffold_1128_curated_16
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14122..14700
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A3D1_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD83206.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
carbonic anhydrase/acetyltransferase, isoleucine patch superfamily
scnpilot_p_inoc_scaffold_1128_curated_17
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14700..15461
DNA (762bp) protein (254aa)
Thymidylate kinase {ECO:0000313|EMBL:KJL29906.1}; EC=2.7.4.9 {ECO:0000313|EMBL:KJL29906.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
putative phosphoribulokinase/uridine kinase; K00876 uridine kinase [EC:2.7.1.48]
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ALZ0_9MICO
scnpilot_p_inoc_scaffold_1128_curated_18
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15738..17231
DNA (1494bp) protein (498aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
Trigger factor n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A2G6_9MICO
tig; FKBP-type peptidyl-prolyl cis-trans isomerase; K03545 trigger factor
scnpilot_p_inoc_scaffold_1128_curated_19
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17404..17988
DNA (585bp) protein (195aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
clpP; protease subunit of ATP-dependent Clp protease; K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3B3W6_9MICO
scnpilot_p_inoc_scaffold_1128_curated_20
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18000..18665
DNA (666bp) protein (222aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
clpP2; protease subunit of ATP-dependent Clp protease; K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A9L0_9MICO
scnpilot_p_inoc_scaffold_1128_curated_21
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18821..20089
DNA (1269bp) protein (423aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=2 Tax=Microbacterium RepID=H8E4N0_9MICO
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
clpX; ATP-dependent protease Clp, ATPase subunit; K03544 ATP-dependent Clp protease ATP-binding subunit ClpX
scnpilot_p_inoc_scaffold_1128_curated_22
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20094..20657
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ALZ4_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KIC56169.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
scnpilot_p_inoc_scaffold_1128_curated_23
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20707..22764)
DNA (2058bp) protein (686aa)
Zn-dependent oligopeptidase; K01284 peptidyl-dipeptidase Dcp [EC:3.4.15.5]
Peptidyl-dipeptidase Dcp n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A2G9_9MICO
Dipeptidyl carboxypeptidase II {ECO:0000313|EMBL:KIC56094.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
scnpilot_p_inoc_scaffold_1128_curated_24
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22836..23456
DNA (621bp) protein (207aa)
Regulatory protein ArsR n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E829_9MICO
Transcriptional regulator {ECO:0000313|EMBL:KIC56093.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
transcriptional regulator
scnpilot_p_inoc_scaffold_1128_curated_25
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23839..24750
DNA (912bp) protein (304aa)
Major facilitator superfamily MFS_1 n=2 Tax=Microbacterium RepID=H8E830_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ52853.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
Major facilitator superfamily Permease
scnpilot_p_inoc_scaffold_1128_curated_26
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25179..25427)
DNA (249bp) protein (83aa)
Fe-S oxidoreductase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E832_9MICO
Fe-S osidoreductase {ECO:0000313|EMBL:EXJ52809.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
Fe-S oxidoreductase
scnpilot_p_inoc_scaffold_1128_curated_27
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(25429..27039)
DNA (1611bp) protein (537aa)
Valine--tRNA ligase {ECO:0000256|SAAS:SAAS00105779}; EC=6.1.1.9 {ECO:0000256|SAAS:SAAS00105779};; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
valS; valyl-tRNA synthetase; K01873 valyl-tRNA synthetase [EC:6.1.1.9]
Valine--tRNA ligase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E833_9MICO
Displaying 27 items

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