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scnpilot_p_inoc_scaffold_1408_curated

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Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1408_curated_1
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3..587)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AUN7_9MICO
GntR family transcriptional regulator {ECO:0000313|EMBL:EXJ52105.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
GntR family transcriptional regulator
scnpilot_p_inoc_scaffold_1408_curated_2
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

647..1852
DNA (1206bp) protein (402aa)
Major facilitator superfamily MFS_1 n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E959_9MICO
MFS transporter {ECO:0000313|EMBL:EXJ52106.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
major facilitator superfamily protein
scnpilot_p_inoc_scaffold_1408_curated_3
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1862..2608
DNA (747bp) protein (249aa)
short-chain dehydrogenase/reductase SDR; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
Short-chain dehydrogenase/reductase SDR n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E960_9MICO
Short-chain dehydrogenase {ECO:0000313|EMBL:KIC57993.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
scnpilot_p_inoc_scaffold_1408_curated_4
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2654..3304)
DNA (651bp) protein (217aa)
Regulatory protein GntR HTH n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E961_9MICO
GntR family transcriptional regulator {ECO:0000313|EMBL:EXJ52108.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
transcriptional regulator
scnpilot_p_inoc_scaffold_1408_curated_5
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3513..3719
DNA (207bp) protein (69aa)
Cold-shock protein DNA-binding protein n=2 Tax=Microbacterium RepID=H8E962_9MICO
Cold-shock protein {ECO:0000313|EMBL:KIC57994.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
csp; cold shock proteins; K03704 cold shock protein (beta-ribbon, CspA family)
scnpilot_p_inoc_scaffold_1408_curated_6
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3901..4596)
DNA (696bp) protein (232aa)
phosphatase; K01091 phosphoglycolate phosphatase [EC:3.1.3.18]
Haloacid dehalogenase domain protein hydrolase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E963_9MICO
Haloacid dehalogenase domain protein hydrolase {ECO:0000313|EMBL:EIC06543.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
scnpilot_p_inoc_scaffold_1408_curated_7
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4617..5309)
DNA (693bp) protein (231aa)
Endonuclease NucS {ECO:0000256|HAMAP-Rule:MF_00722}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00722};; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
Endonuclease NucS n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ABP3_9MICO
nuclease of the RecB family; K07503 hypothetical protein
scnpilot_p_inoc_scaffold_1408_curated_8
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5354..6691)
DNA (1338bp) protein (446aa)
HNH endonuclease n=2 Tax=Microbacterium RepID=H8E4U4_9MICO
HNH endonuclease {ECO:0000313|EMBL:EXJ52113.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1408_curated_9
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6775..8109)
DNA (1335bp) protein (445aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A9H1_9MICO
MFS transporter permease {ECO:0000313|EMBL:EXJ52114.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
permease of the major facilitator superfamily
scnpilot_p_inoc_scaffold_1408_curated_10
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8116..9165
DNA (1050bp) protein (350aa)
Regulatory protein LacI n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E968_9MICO
Transcriptional regulator {ECO:0000313|EMBL:KIC58001.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
transcriptional regulator
scnpilot_p_inoc_scaffold_1408_curated_11
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9222..12149
DNA (2928bp) protein (976aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ABN8_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD85811.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
NADH:ubiquinone oxidoreductase subunit 5 (chain L)/multisubunit Na+/H+ antiporter, MnhA subunit; K05565 multicomponent Na+:H+ antiporter subunit A
scnpilot_p_inoc_scaffold_1408_curated_12
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12146..12691
DNA (546bp) protein (182aa)
Multicomponent Na+:H+ antiporter subunit C n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AGB6_9MICO
Sodium:proton antiporter {ECO:0000313|EMBL:EXJ52117.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
multisubunit Na+/H+ antiporter, MnhC subunit; K05567 multicomponent Na+:H+ antiporter subunit C
scnpilot_p_inoc_scaffold_1408_curated_13
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12688..14253
DNA (1566bp) protein (522aa)
Multicomponent Na+:H+ antiporter subunit D n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3BB35_9MICO
Multicomponent Na+:H+ antiporter subunit D {ECO:0000313|EMBL:EPD85809.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit; K05568 multicomponent Na+:H+ antiporter subunit D
scnpilot_p_inoc_scaffold_1408_curated_14
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14250..14831
DNA (582bp) protein (194aa)
Cation antiporter n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E9D5_9MICO
Cation antiporter {ECO:0000313|EMBL:EIC06402.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
multisubunit Na+/H+ antiporter, MnhE subunit; K05569 multicomponent Na+:H+ antiporter subunit E
scnpilot_p_inoc_scaffold_1408_curated_15
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14828..15097
DNA (270bp) protein (90aa)
Multisubunit Na+/H+ antiporter, MnhF subunit n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E9D6_9MICO
Multisubunit Na+/H+ antiporter, MnhF subunit {ECO:0000313|EMBL:EIC06403.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
multisubunit Na+/H+ antiporter, MnhF subunit; K05570 multicomponent Na+:H+ antiporter subunit F
scnpilot_p_inoc_scaffold_1408_curated_16
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15094..15450
DNA (357bp) protein (119aa)
Monovalent cation/proton antiporter, MnhG/PhaG subunit n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ABN5_9MICO
Monovalent cation/proton antiporter, MnhG/PhaG subunit {ECO:0000313|EMBL:EPD85806.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
multisubunit Na+/H+ antiporter, MnhG subunit; K05571 multicomponent Na+:H+ antiporter subunit G
scnpilot_p_inoc_scaffold_1408_curated_17
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15739..16302
DNA (564bp) protein (188aa)
GCN5-related N-acetyltransferase n=2 Tax=Microbacterium RepID=H8E9D8_9MICO
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:EIC06405.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1408_curated_18
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16322..17767)
DNA (1446bp) protein (482aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3BB31_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD85804.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
putative dehydrogenase
scnpilot_p_inoc_scaffold_1408_curated_19
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18110..19963)
DNA (1854bp) protein (618aa)
YhgE/Pip C-terminal domain protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E9E0_9MICO
YhgE/Pip C-terminal domain protein {ECO:0000313|EMBL:EIC06407.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein; K01421 putative membrane protein
scnpilot_p_inoc_scaffold_1408_curated_20
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19960..20655)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E9E1_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC06408.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1408_curated_21
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20655..21278)
DNA (624bp) protein (208aa)
Regulatory protein TetR n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E9E2_9MICO
Regulatory protein TetR {ECO:0000313|EMBL:EIC06409.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
transcriptional regulator
Displaying 21 items

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