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scnpilot_p_inoc_scaffold_957_curated

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_957_curated_1
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3..341)
DNA (339bp) protein (113aa)
phosphotransferase system, mannitol-specific IIBC component; K02798 PTS system, mannitol-specific IIA component [EC:2.7.1.69]; K02799 PTS system, mannitol-specific IIB component [EC:2.7.1.69]; K02800 PTS system, mannitol-specific IIC component
Phosphotransferase system lactose/cellobiose-specific IIB subunit n=2 Tax=Microbacterium RepID=H8E1F1_9MICO
Phosphotransferase system lactose/cellobiose-specific IIB subunit {ECO:0000313|EMBL:EIC08971.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
scnpilot_p_inoc_scaffold_957_curated_2
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(373..2037)
DNA (1665bp) protein (555aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
ptsI; phosphoenolpyruvate-protein kinase; K08483 phosphotransferase system, enzyme I, PtsI [EC:2.7.3.9]
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1F2_9MICO
scnpilot_p_inoc_scaffold_957_curated_3
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(2058..2333)
DNA (276bp) protein (92aa)
Phosphocarrier, HPr family n=2 Tax=Microbacterium RepID=H8E1F3_9MICO
Phosphocarrier protein {ECO:0000313|EMBL:EPD86761.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
phosphotransferase system, HPr-related protein; K11189 phosphocarrier protein
scnpilot_p_inoc_scaffold_957_curated_4
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2330..2674)
DNA (345bp) protein (115aa)
phosphotransferase system cellobiose-specific component IIB; K02760 PTS system, cellobiose-specific IIB component [EC:2.7.1.69]
Phosphotransferase system lactose/cellobiose-specific IIB subunit n=2 Tax=Microbacterium RepID=H8E1F4_9MICO
Phosphotransferase system lactose/cellobiose-specific IIB subunit {ECO:0000313|EMBL:EIC08974.1}; Flags: Precursor;; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
scnpilot_p_inoc_scaffold_957_curated_5
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2784..4709
DNA (1926bp) protein (642aa)
PRD domain protein n=2 Tax=Microbacterium RepID=H8E1F5_9MICO
Lichenan operon transcriptional antiterminator {ECO:0000313|EMBL:EPD86759.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
transcriptional antiterminator; K03491 lichenan operon transcriptional antiterminator
scnpilot_p_inoc_scaffold_957_curated_6
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4743..5309)
DNA (567bp) protein (189aa)
GCN5-related N-acetyltransferase n=2 Tax=Microbacterium RepID=H8E1F6_9MICO
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:EIC08976.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
N-acetyltransferase (GCN5-related)
scnpilot_p_inoc_scaffold_957_curated_7
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5445..7124)
DNA (1680bp) protein (560aa)
cpsG; phosphomannomutase; K01840 phosphomannomutase [EC:5.4.2.8]
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1F7_9MICO
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I {ECO:0000313|EMBL:EIC08977.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
scnpilot_p_inoc_scaffold_957_curated_8
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(7121..7945)
DNA (825bp) protein (275aa)
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
deoD; purine nucleoside phosphorylase; K03783 purine-nucleoside phosphorylase [EC:2.4.2.1]
Purine nucleoside phosphorylase n=2 Tax=Microbacterium RepID=H8E1F8_9MICO
scnpilot_p_inoc_scaffold_957_curated_9
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8060..9511
DNA (1452bp) protein (484aa)
lpdA; pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component; K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4]
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=2 Tax=Microbacterium RepID=H8E1F9_9MICO
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EIC08979.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
scnpilot_p_inoc_scaffold_957_curated_10
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9548..9865)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1G0_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC08980.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
scnpilot_p_inoc_scaffold_957_curated_11
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10000..11796)
DNA (1797bp) protein (599aa)
accC; acetyl/propionyl-CoA carboxylase, alpha subunit; K11263 acetyl-/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.3.4.14]
Acetyl-/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ACB5_9MICO
Acetyl-/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein {ECO:0000313|EMBL:EPD86753.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
scnpilot_p_inoc_scaffold_957_curated_12
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11875..12564)
DNA (690bp) protein (230aa)
Maf-like protein OR221_0690 n=2 Tax=Microbacterium RepID=H8E1G2_9MICO
Maf-like protein OR221_0690 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
nucleotide-binding protein; K06287 septum formation protein
scnpilot_p_inoc_scaffold_957_curated_13
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12623..13969
DNA (1347bp) protein (449aa)
SAM-dependent methyltransferase; K00599 [EC:2.1.1.-]
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AEQ5_9MICO
23S rRNA methyltransferase {ECO:0000313|EMBL:EXJ53175.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
scnpilot_p_inoc_scaffold_957_curated_14
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14041..14709
DNA (669bp) protein (223aa)
Regulatory protein LuxR n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1G4_9MICO
Regulatory protein LuxR {ECO:0000313|EMBL:EIC08984.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
scnpilot_p_inoc_scaffold_957_curated_15
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14699..15937
DNA (1239bp) protein (413aa)
ATP-binding region ATPase domain protein n=2 Tax=Microbacterium RepID=H8E1G5_9MICO
ATP-binding region ATPase domain protein {ECO:0000313|EMBL:EIC08985.1}; Flags: Precursor;; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
signal transduction histidine kinase
scnpilot_p_inoc_scaffold_957_curated_16
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15934..16974
DNA (1041bp) protein (347aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ACB2_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD86748.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
hypothetical protein
scnpilot_p_inoc_scaffold_957_curated_17
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17219..17458)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AXJ3_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD86747.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
hypothetical protein
scnpilot_p_inoc_scaffold_957_curated_18
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17470..19095)
DNA (1626bp) protein (542aa)
pccB; acetyl-CoA carboxylase, carboxyltransferase component; K01966 propionyl-CoA carboxylase beta chain [EC:6.4.1.3]
Carboxyl transferase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1G8_9MICO
Carboxyl transferase {ECO:0000313|EMBL:EIC08988.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
scnpilot_p_inoc_scaffold_957_curated_19
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19224..20003
DNA (780bp) protein (260aa)
biotin-(acetyl-CoA carboxylase) ligase; K03524 BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
Biotin/acetyl-CoA-carboxylase ligase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1G9_9MICO
Biotin--acetyl-CoA-carboxylase ligase {ECO:0000313|EMBL:KIC59584.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
scnpilot_p_inoc_scaffold_957_curated_20
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20095..20673
DNA (579bp) protein (193aa)
Membrane-flanked domain DUF304 n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1H0_9MICO
Membrane protein {ECO:0000313|EMBL:KIC59621.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hypothetical protein
scnpilot_p_inoc_scaffold_957_curated_21
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20771..21886
DNA (1116bp) protein (372aa)
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; EC=6.3.4.18 {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; 5-(carboxyamino)imidazole ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="M
purK; phosphoribosylaminoimidazole carboxylase; K01589 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
Phosphoribosylaminoimidazole carboxylase, ATPase subunit n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ACA9_9MICO
scnpilot_p_inoc_scaffold_957_curated_22
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22242..22709
DNA (468bp) protein (156aa)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
phosphoribosylcarboxyaminoimidazole (NCAIR) mutase; K01588 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1H2_9MICO
scnpilot_p_inoc_scaffold_957_curated_23
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22706..24169
DNA (1464bp) protein (488aa)
Cell envelope-related transcriptional attenuator n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1H3_9MICO
Cell envelope-related transcriptional attenuator {ECO:0000313|EMBL:EIC08993.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
transcriptional regulator
scnpilot_p_inoc_scaffold_957_curated_24
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24173..25294
DNA (1122bp) protein (374aa)
Glycosyl transferase group 1 n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1H4_9MICO
Glycosyl transferase group 1 {ECO:0000313|EMBL:EIC08994.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
glycosyltransferase
scnpilot_p_inoc_scaffold_957_curated_25
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25316..26230
DNA (915bp) protein (305aa)
Glycosyl transferase family 2 n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1H5_9MICO
Glycosyl transferase {ECO:0000313|EMBL:KIC59580.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
glycosyltransferase
scnpilot_p_inoc_scaffold_957_curated_26
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26239..26976)
DNA (738bp) protein (246aa)
ABC transporter ATP-binding protein n=1 Tax=Microbacterium sp. B19 RepID=UPI00034901BA
Contig_38, whole genome shotgun sequence {ECO:0000313|EMBL:KIP88399.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
wzt; putative polysaccharide ABC transporter ATP-binding protein; K09691 lipopolysaccharide transport system ATP-binding protein
scnpilot_p_inoc_scaffold_957_curated_27
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26960..27823)
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035C7097
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
polysaccharide ABC transport integral membrane protein; K09690 lipopolysaccharide transport system permease protein
scnpilot_p_inoc_scaffold_957_curated_28
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27905..30040
DNA (2136bp) protein (712aa)
hypothetical protein n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=UPI000378529A
Uncharacterized protein {ECO:0000313|EMBL:EXJ51353.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
glycosyltransferase domain
scnpilot_p_inoc_scaffold_957_curated_29
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30041..32278)
DNA (2238bp) protein (746aa)
hypothetical protein n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=UPI000378529A
Uncharacterized protein {ECO:0000313|EMBL:EXJ51354.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
glycosyltransferase
Displaying 29 items

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