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scnpilot_p_inoc_scaffold_803_curated

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Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_803_curated_1
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

193..1323
-----------------
DNA (1131bp)
protein (377aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
ispG; hypothetical protein; K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1]
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ABU2_9MICO
scnpilot_p_inoc_scaffold_803_curated_2
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1421..1579
-----------------
DNA (159bp)
protein (53aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E241_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ51224.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
scnpilot_p_inoc_scaffold_803_curated_3
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1604..3352)
-----------------
DNA (1749bp)
protein (583aa)
cystathionine gamma-synthase (EC:2.5.1.48); K01761 methionine-gamma-lyase [EC:4.4.1.11]
Uncharacterized protein n=2 Tax=Microbacterium RepID=S3AE84_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD86601.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
scnpilot_p_inoc_scaffold_803_curated_4
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3396..4430)
-----------------
DNA (1035bp)
protein (345aa)
1-aminocyclopropane-1-carboxylate deaminase {ECO:0000313|EMBL:EXJ51227.1}; EC=3.5.99.7 {ECO:0000313|EMBL:EXJ51227.1};; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
1-aminocyclopropane-1-carboxylate deaminase; K01505 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7]
1-aminocyclopropane-1-carboxylate deaminase n=2 Tax=Microbacterium RepID=H8E244_9MICO
scnpilot_p_inoc_scaffold_803_curated_5
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4427..5044)
-----------------
DNA (618bp)
protein (206aa)
Regulatory protein GntR HTH n=2 Tax=Microbacterium RepID=H8E245_9MICO
GntR family transcriptional regulator {ECO:0000313|EMBL:KIC58356.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
GntR family transcriptional regulator
scnpilot_p_inoc_scaffold_803_curated_6
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5156..6472)
-----------------
DNA (1317bp)
protein (439aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037B3559
Uncharacterized protein {ECO:0000313|EMBL:EXJ51229.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
exoribonuclease
scnpilot_p_inoc_scaffold_803_curated_7
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


6652..8409
-----------------
DNA (1758bp)
protein (586aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00011671}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00089874};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01569}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
proS; prolyl-tRNA synthetase; K01881 prolyl-tRNA synthetase [EC:6.1.1.15]
Proline--tRNA ligase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AE79_9MICO
scnpilot_p_inoc_scaffold_803_curated_8
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8503..9909)
-----------------
DNA (1407bp)
protein (469aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AIH9_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD86595.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
HNH endonuclease
scnpilot_p_inoc_scaffold_803_curated_9
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10077..11702
-----------------
DNA (1626bp)
protein (542aa)
Endoglucanase {ECO:0000256|RuleBase:RU361153}; EC=3.2.1.4 {ECO:0000256|RuleBase:RU361153};; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
endoglucanase; K01179 endoglucanase [EC:3.2.1.4]
Glycoside hydrolase family 5 n=2 Tax=Microbacterium RepID=H8E249_9MICO
scnpilot_p_inoc_scaffold_803_curated_10
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11743..12798
-----------------
DNA (1056bp)
protein (352aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E250_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ51233.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
Decarboxylase family protein
scnpilot_p_inoc_scaffold_803_curated_11
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12831..13118)
-----------------
DNA (288bp)
protein (96aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AX02_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ51234.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
scnpilot_p_inoc_scaffold_803_curated_12
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13181..13972)
-----------------
DNA (792bp)
protein (264aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2XR08_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ51235.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_803_curated_13
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13969..14595)
-----------------
DNA (627bp)
protein (209aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E254_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC09224.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein
scnpilot_p_inoc_scaffold_803_curated_14
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14702..15688
-----------------
DNA (987bp)
protein (329aa)
Transcription termination factor NusA n=2 Tax=Microbacterium RepID=H8E255_9MICO
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
nusA; transcription elongation factor; K02600 N utilization substance protein A
scnpilot_p_inoc_scaffold_803_curated_15
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16102..18849
-----------------
DNA (2748bp)
protein (916aa)
Translation initiation factor IF-2 n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E256_9MICO
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
infB; translation initiation factor 2 (IF-2; GTPase); K02519 translation initiation factor IF-2
scnpilot_p_inoc_scaffold_803_curated_16
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18989..19423
-----------------
DNA (435bp)
protein (145aa)
Ribosome-binding factor A n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ACR4_9MICO
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
rbfA; ribosome-binding factor A; K02834 ribosome-binding factor A
scnpilot_p_inoc_scaffold_803_curated_17
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19434..20300)
-----------------
DNA (867bp)
protein (289aa)
nth; A/G-specific DNA glycosylase; K03575 A/G-specific adenine glycosylase [EC:3.2.2.-]
A/G-specific adenine glycosylase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AXZ8_9MICO
Adenine glycosylase {ECO:0000313|EMBL:EXJ51046.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
scnpilot_p_inoc_scaffold_803_curated_18
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20552..21469
-----------------
DNA (918bp)
protein (306aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043744}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043720};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
pseudouridine synthase; K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25]
tRNA pseudouridine synthase B n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AFD9_9MICO
scnpilot_p_inoc_scaffold_803_curated_19
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21466..21834
-----------------
DNA (369bp)
protein (123aa)
Glycogen synthase n=2 Tax=Microbacterium RepID=H8E260_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD86935.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
glycogen synthase
scnpilot_p_inoc_scaffold_803_curated_20
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21878..22384
-----------------
DNA (507bp)
protein (169aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E261_9MICO
Membrane protein {ECO:0000313|EMBL:EXJ51049.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
DNA uptake lipoprotein
scnpilot_p_inoc_scaffold_803_curated_21
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22381..23328
-----------------
DNA (948bp)
protein (316aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
FAD synthase; K11753 riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
Riboflavin biosynthesis protein RibF n=2 Tax=Microbacterium RepID=H8E262_9MICO
scnpilot_p_inoc_scaffold_803_curated_22
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23350..24066)
-----------------
DNA (717bp)
protein (239aa)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202};; 2-deoxy-D-ribose 5-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114}; Phosphodeoxyriboaldolase {ECO:0000256|HAMAP-Rule:MF_00114}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
deoxyribose-phosphate aldolase (EC:4.1.2.4); K01619 deoxyribose-phosphate aldolase [EC:4.1.2.4]
Deoxyribose-phosphate aldolase n=2 Tax=Microbacterium RepID=H8E263_9MICO
scnpilot_p_inoc_scaffold_803_curated_23
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24169..24378
-----------------
DNA (210bp)
protein (70aa)
Heavy metal transport/detoxification protein n=2 Tax=Microbacterium RepID=H8E264_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD86931.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
heavy metal transport/detoxification protein
scnpilot_p_inoc_scaffold_803_curated_24
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24470..26692
-----------------
DNA (2223bp)
protein (741aa)
cation transport ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4]
Copper-translocating P-type ATPase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AJB9_9MICO
Copper-translocating P-type ATPase {ECO:0000313|EMBL:EPD86930.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
scnpilot_p_inoc_scaffold_803_curated_25
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26899..29076
-----------------
DNA (2178bp)
protein (726aa)
SNF2-related protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E266_9MICO
Helicase {ECO:0000313|EMBL:EXJ51055.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
superfamily II DNA/RNA helicase, SNF2 family
scnpilot_p_inoc_scaffold_803_curated_26
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29189..30217
-----------------
DNA (1029bp)
protein (343aa)
6-phosphofructokinase {ECO:0000313|EMBL:EXJ51056.1}; EC=2.7.1.11 {ECO:0000313|EMBL:EXJ51056.1};; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
pfkA; 6-phosphofructokinase; K00850 6-phosphofructokinase [EC:2.7.1.11]
6-phosphofructokinase n=2 Tax=Microbacterium RepID=H8E267_9MICO
scnpilot_p_inoc_scaffold_803_curated_27
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30469..31383
-----------------
DNA (915bp)
protein (305aa)
Uncharacterized protein n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NA86_MICTS
Uncharacterized protein {ECO:0000313|EMBL:EXJ51057.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_803_curated_28
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31583..33706)
-----------------
DNA (2124bp)
protein (708aa)
protease II; K01354 oligopeptidase B [EC:3.4.21.83]
Peptidase S9A prolyl oligopeptidase domain protein beta-propeller n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E269_9MICO
Peptidase S9A prolyl oligopeptidase domain protein beta-propeller {ECO:0000313|EMBL:EIC09239.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
scnpilot_p_inoc_scaffold_803_curated_29
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33883..35235
-----------------
DNA (1353bp)
protein (451aa)
Phosphate transporter n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E270_9MICO
Phosphate transporter {ECO:0000313|EMBL:EIC09240.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
phosphate/sulphate permease; K03306 inorganic phosphate transporter, PiT family
scnpilot_p_inoc_scaffold_803_curated_30
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35235..35567
-----------------
DNA (333bp)
protein (111aa)
Membrane protease subunit, stomatin/prohibitin like protein n=2 Tax=Microbacterium RepID=H8E271_9MICO
Membrane protease subunit, stomatin/prohibitin like protein {ECO:0000313|EMBL:EIC09241.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
membrane protease subunits, stomatin/prohibitin homologs
Displaying items 1-30 of 36 in total

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