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scnpilot_p_inoc_scaffold_3195_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_3195_curated_1
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..1191)
DNA (1191bp) protein (397aa)
Putative conjugative relaxase n=1 Tax=Kineosphaera limosa NBRC 100340 RepID=K6W624_9MICO
Conjugal transfer protein {ECO:0000313|EMBL:EXJ52921.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
TrwC relaxase
scnpilot_p_inoc_scaffold_3195_curated_2
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1297..1713)
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Mycobacterium abscessus RepID=UPI0003449C1D
Uncharacterized protein {ECO:0000313|EMBL:EXJ52920.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_3195_curated_3
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1719..1916)
DNA (198bp) protein (66aa)
Uncharacterized protein {ECO:0000313|EMBL:EXJ52935.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
scnpilot_p_inoc_scaffold_3195_curated_4
unknown

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comp(1934..2839)
DNA (906bp) protein (302aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_3195_curated_5
Gordonia araii, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(2842..3249)
DNA (408bp) protein (136aa)
ATPase AAA n=1 Tax=Rhodococcus opacus RepID=UPI00029CAE07
Putative uncharacterized protein {ECO:0000313|EMBL:GAB08850.1}; TaxID=1073574 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia araii NBRC 100433.;"
hypothetical protein
scnpilot_p_inoc_scaffold_3195_curated_6
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3581..4753)
DNA (1173bp) protein (391aa)
3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase {ECO:0000313|EMBL:KJL37353.1}; EC=2.3.1.174 {ECO:0000313|EMBL:KJL37353.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
acetyl-CoA acetyltransferase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036ECBD3
fadA; acetyl-CoA acetyltransferase
scnpilot_p_inoc_scaffold_3195_curated_7
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(4850..6052)
DNA (1203bp) protein (401aa)
acyl-CoA dehydrogenase domain-containing protein; K00252 glutaryl-CoA dehydrogenase [EC:1.3.99.7]
Acyl-CoA dehydrogenase domain-containing protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E9M6_9MICO
Acyl-CoA dehydrogenase domain-containing protein {ECO:0000313|EMBL:EIC06374.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
scnpilot_p_inoc_scaffold_3195_curated_8
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(6054..7301)
DNA (1248bp) protein (416aa)
Succinyl-CoA:(R)-benzylsuccinate CoA-transferase subunit BbsF {ECO:0000313|EMBL:KJL37355.1}; EC=2.8.3.15 {ECO:0000313|EMBL:KJL37355.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E9M5_9MICO
L-carnitine dehydratase/bile acid-inducible protein F
scnpilot_p_inoc_scaffold_3195_curated_9
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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7530..8285
DNA (756bp) protein (252aa)
Cyclopentanol dehydrogenase {ECO:0000313|EMBL:KJL37356.1}; EC=1.1.1.163 {ECO:0000313|EMBL:KJL37356.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
Short-chain dehydrogenase/reductase SDR n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E9M4_9MICO
short-chain dehydrogenase/reductase SDR
scnpilot_p_inoc_scaffold_3195_curated_10
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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8384..9283
DNA (900bp) protein (300aa)
LysR substrate-binding protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E9M3_9MICO
HTH-type transcriptional regulator CatM {ECO:0000313|EMBL:KJL37357.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
transcriptional regulator
scnpilot_p_inoc_scaffold_3195_curated_11
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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9518..10252
DNA (735bp) protein (245aa)
Succinate-semialdehyde dehydrogenase [NADP(+)] 1 {ECO:0000313|EMBL:KJL37361.1}; EC=1.2.1.79 {ECO:0000313|EMBL:KJL37361.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
chnE; 6-oxohexanoate dehydrogenase (EC:1.2.1.63); K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16]
Aldehyde Dehydrogenase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E9L9_9MICO
Displaying 11 items

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