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scnpilot_p_inoc_scaffold_921_curated

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_921_curated_1
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3..413)
DNA (411bp) protein (137aa)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818}; Short=GSA {ECO:0000256|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818};; Glutamate-1-semialdehyde aminotransferase {ECO:0000256|HAMAP-Rule:MF_00375}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
glutamate-1-semialdehyde 2,1-aminomutase (EC:5.4.3.8); K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E7E5_9MICO
scnpilot_p_inoc_scaffold_921_curated_2
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(410..1405)
DNA (996bp) protein (332aa)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
hemB; delta-aminolevulinic acid dehydratase; K01698 porphobilinogen synthase [EC:4.2.1.24]
Delta-aminolevulinic acid dehydratase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3B9I6_9MICO
scnpilot_p_inoc_scaffold_921_curated_3
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1402..2184)
DNA (783bp) protein (261aa)
hemD; uroporphyrinogen-III synthase; K01719 uroporphyrinogen-III synthase [EC:4.2.1.75]
Uroporphyrinogen III synthase HEM4 n=2 Tax=Microbacterium RepID=H8E7E3_9MICO
Uroporphyrinogen III synthase HEM4 {ECO:0000313|EMBL:EIC07134.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
scnpilot_p_inoc_scaffold_921_curated_4
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2181..3152)
DNA (972bp) protein (324aa)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Pre-uroporphyrinogen synthase {ECO:0000256|HAMAP-Rule:MF_00260}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
hemC; porphobilinogen deaminase (EC:2.5.1.61); K01749 hydroxymethylbilane synthase [EC:2.5.1.61]
Porphobilinogen deaminase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AT42_9MICO
scnpilot_p_inoc_scaffold_921_curated_5
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3149..4381)
DNA (1233bp) protein (411aa)
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|SAAS:SAAS00128522}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|SAAS:SAAS00128522};; Heme synthase {ECO:0000256|HAMAP-Rule:MF_00323}; Protoheme ferro-lyase {ECO:0000256|HAMAP-Rule:MF_00323}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hemH; ferrochelatase (EC:4.99.1.1); K01772 ferrochelatase [EC:4.99.1.1]
Ferrochelatase n=2 Tax=Microbacterium RepID=H8E7E1_9MICO
scnpilot_p_inoc_scaffold_921_curated_6
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4381..5067)
DNA (687bp) protein (229aa)
Chlorite dismutase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E7E0_9MICO
Chlorite dismutase {ECO:0000313|EMBL:EXJ52985.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein; K09162 hypothetical protein
scnpilot_p_inoc_scaffold_921_curated_7
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5077..6561)
DNA (1485bp) protein (495aa)
hemG; protoporphyrinogen oxidase; K00231 oxygen-dependent protoporphyrinogen oxidase [EC:1.3.3.4]
FAD dependent oxidoreductase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E7D9_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ53074.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
scnpilot_p_inoc_scaffold_921_curated_8
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6558..7805)
DNA (1248bp) protein (416aa)
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554};; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37)
Uroporphyrinogen decarboxylase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A804_9MICO
scnpilot_p_inoc_scaffold_921_curated_9
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7845..9047
DNA (1203bp) protein (401aa)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584};; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
glutamyl-tRNA reductase; K02492 glutamyl-tRNA reductase [EC:1.2.1.70]
Glutamyl-tRNA reductase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AT38_9MICO
scnpilot_p_inoc_scaffold_921_curated_10
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9044..10000
DNA (957bp) protein (319aa)
Regulatory protein LacI n=2 Tax=Microbacterium RepID=H8E7D6_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ53073.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
transcriptional regulator
scnpilot_p_inoc_scaffold_921_curated_11
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10048..11340
DNA (1293bp) protein (431aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AEZ7_9MICO
Antibiotic transporter {ECO:0000313|EMBL:EXJ52982.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
major facilitator superfamily protein
scnpilot_p_inoc_scaffold_921_curated_12
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11428..11961)
DNA (534bp) protein (178aa)
DNA damage repair protein MutT n=1 Tax=Microbacterium sp. B19 RepID=UPI00034BC680
DNA damage repair protein MutT {ECO:0000313|EMBL:EXJ52981.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
NTP pyrophosphohydrolase including oxidative damage repair enzyme
scnpilot_p_inoc_scaffold_921_curated_13
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11964..12857)
DNA (894bp) protein (298aa)
Mg-dependent DNase; K03424 TatD DNase family protein [EC:3.1.21.-]
Hydrolase, TatD family n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E7D3_9MICO
Deoxyribonuclease {ECO:0000313|EMBL:EXJ52980.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
scnpilot_p_inoc_scaffold_921_curated_14
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(13000..14565)
DNA (1566bp) protein (522aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00012840}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00012840};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
metG; methionyl-tRNA synthetase; K01874 methionyl-tRNA synthetase [EC:6.1.1.10]
Methionine--tRNA ligase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E7D2_9MICO
scnpilot_p_inoc_scaffold_921_curated_15
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14640..15653)
DNA (1014bp) protein (338aa)
Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E7D1_9MICO
Periplasmic binding protein/LacI transcriptional regulator {ECO:0000313|EMBL:EIC07122.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
transcriptional regulator
scnpilot_p_inoc_scaffold_921_curated_16
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15886..17139
DNA (1254bp) protein (418aa)
Extracellular solute-binding protein family 1 n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E7D0_9MICO
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:EIC07121.1}; Flags: Precursor;; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
malE; maltose-binding protein; K10108 maltose/maltodextrin transport system substrate-binding protein
scnpilot_p_inoc_scaffold_921_curated_17
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17213..18841
DNA (1629bp) protein (543aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E7C9_9MICO
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:EIC07120.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
binding-protein-dependent transport system inner membrane protein; K10109 maltose/maltodextrin transport system permease protein
scnpilot_p_inoc_scaffold_921_curated_18
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18843..19775
DNA (933bp) protein (311aa)
maltooligosaccharides ABC transporter inner membrane subunit (EC:3.6.3.-)
ABC-type transporter, integral membrane subunit n=2 Tax=Microbacterium RepID=H8E7C8_9MICO
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:EIC07119.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
scnpilot_p_inoc_scaffold_921_curated_19
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19889..21841
DNA (1953bp) protein (651aa)
alpha-amylase; K01187 alpha-glucosidase [EC:3.2.1.20]
Alpha amylase catalytic region n=2 Tax=Microbacterium RepID=H8E7C7_9MICO
Alpha amylase catalytic region {ECO:0000313|EMBL:EIC07118.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
scnpilot_p_inoc_scaffold_921_curated_20
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21849..22664)
DNA (816bp) protein (272aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
methyltransferase; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E7C6_9MICO
scnpilot_p_inoc_scaffold_921_curated_21
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22688..24286
DNA (1599bp) protein (533aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AEZ0_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD85250.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
dolichyl-phosphate-mannose--protein O-mannosyl transferase
scnpilot_p_inoc_scaffold_921_curated_22
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24332..25387
DNA (1056bp) protein (352aa)
Cobalamin synthesis protein P47K n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E7C4_9MICO
Cobalamin synthesis protein P47K {ECO:0000313|EMBL:EIC07115.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein
scnpilot_p_inoc_scaffold_921_curated_23
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25412..26299)
DNA (888bp) protein (296aa)
2,5-diketo-D-gluconic acid reductase {ECO:0000313|EMBL:EXJ51292.1}; EC=1.1.1.274 {ECO:0000313|EMBL:EXJ51292.1};; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
aldo/keto reductase; K06221 2,5-diketo-D-gluconate reductase A [EC:1.1.1.274]
Aldo/keto reductase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E7C3_9MICO
scnpilot_p_inoc_scaffold_921_curated_24
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26366..26794
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AT25_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ51291.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_921_curated_25
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26794..28407
DNA (1614bp) protein (538aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E7C1_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ51290.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_921_curated_26
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28407..28871
DNA (465bp) protein (155aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E7C0_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC07111.1}; Flags: Precursor;; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
scnpilot_p_inoc_scaffold_921_curated_27
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28868..29530
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3B9G6_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD85244.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
scnpilot_p_inoc_scaffold_921_curated_28
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29556..33548
DNA (3993bp) protein (1331aa)
ATP-dependent helicase; K03578 ATP-dependent helicase HrpA [EC:3.6.4.13]
ATP-dependent helicase HrpA n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A7Z0_9MICO
ATP-dependent helicase {ECO:0000313|EMBL:EXJ51287.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
scnpilot_p_inoc_scaffold_921_curated_29
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33684..34553)
DNA (870bp) protein (290aa)
acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase; K13049 carboxypeptidase PM20D1 [EC:3.4.17.-]
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AT22_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD85242.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
Displaying 29 items

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