ggKbase home page

scnpilot_p_inoc_scaffold_324_curated

Search features with annotation key words

Displaying items 1-30 of 108 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_324_curated_1
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..278)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A6R1_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD84256.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
hypothetical protein
scnpilot_p_inoc_scaffold_324_curated_2
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(380..1030)
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Leucobacter chromiiresistens RepID=UPI000262AF35
Uncharacterized protein {ECO:0000313|EMBL:EXJ52087.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_324_curated_3
Rhodococcus sp. Mel, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1073..1498)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Rhodococcus sp. Mel RepID=H8ZKW4_9NOCA
Uncharacterized protein {ECO:0000313|EMBL:AEX65086.1}; TaxID=1093626 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. Mel.;"
hypothetical protein
scnpilot_p_inoc_scaffold_324_curated_4
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1578..1856)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Rhodococcus sp. Mel RepID=H8ZKW3_9NOCA
Uncharacterized protein {ECO:0000313|EMBL:KJL45911.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein
scnpilot_p_inoc_scaffold_324_curated_5
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2022..3194
DNA (1173bp) protein (391aa)
Uncharacterized protein n=2 Tax=Rhodococcus erythropolis RepID=T5HYJ2_RHOER
Uncharacterized protein {ECO:0000313|EMBL:EXJ50426.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
insertion element ISCmi3 transposase
scnpilot_p_inoc_scaffold_324_curated_6
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3196..3657)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A7P7_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD85163.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
transposase
scnpilot_p_inoc_scaffold_324_curated_7
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3678..3965)
DNA (288bp) protein (96aa)
Transposase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3B976_9MICO
Transposase {ECO:0000313|EMBL:EPD85164.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
Transposase
scnpilot_p_inoc_scaffold_324_curated_8
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4006..4374
DNA (369bp) protein (123aa)
Candidate processive b-glycan synthase, Glycosyltransferase Family 2 n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y0M7_RAMTT
Uncharacterized protein {ECO:0000313|EMBL:EXJ52239.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
processive b-glycan synthase, Glycosyltransferase Family 2
scnpilot_p_inoc_scaffold_324_curated_9
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4486..5100
DNA (615bp) protein (205aa)
Putative 2-hydroxy-3-oxopropionate reductase {ECO:0000313|EMBL:CCH17906.1}; EC=1.1.1.60 {ECO:0000313|EMBL:CCH17906.1};; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
Putative 2-hydroxy-3-oxopropionate reductase n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0L259_9ACTO
putative GCN5-related N-acetyltransferase
scnpilot_p_inoc_scaffold_324_curated_10
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5132..5740)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3B4X5_9MICO
Cyanamide hydratase {ECO:0000313|EMBL:EXJ52236.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
putative phosphohydrolase
scnpilot_p_inoc_scaffold_324_curated_11
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5923..6402
DNA (480bp) protein (160aa)
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
peptide methionine sulfoxide reductase; K07305 peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
Peptide methionine sulfoxide reductase MsrB n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E2G8_9MICO
scnpilot_p_inoc_scaffold_324_curated_12
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6399..6947
DNA (549bp) protein (183aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
peptide methionine sulfoxide reductase; K07304 peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AN74_9MICO
scnpilot_p_inoc_scaffold_324_curated_13
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7008..7472
DNA (465bp) protein (155aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E2H0_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC08700.1}; Flags: Precursor;; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein
scnpilot_p_inoc_scaffold_324_curated_14
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7438..7602)
DNA (165bp) protein (55aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E2H1_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC08701.1}; Flags: Precursor;; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein
scnpilot_p_inoc_scaffold_324_curated_15
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7754..8179
DNA (426bp) protein (142aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E2H2_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC08702.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
scnpilot_p_inoc_scaffold_324_curated_16
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8225..8611
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A3F9_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ52230.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_324_curated_17
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8616..9815
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AN69_9MICO
Sodium/hydrogen exchanger {ECO:0000313|EMBL:EXJ52229.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
sodium/hydrogen exchanger
scnpilot_p_inoc_scaffold_324_curated_18
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9825..10265)
DNA (441bp) protein (147aa)
NrdI protein n=2 Tax=Microbacterium RepID=S3A4K7_9MICO
NrdI protein {ECO:0000313|EMBL:EIC08705.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
NrdI protein; K03647 protein involved in ribonucleotide reduction
scnpilot_p_inoc_scaffold_324_curated_19
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10459..13179
DNA (2721bp) protein (907aa)
alcohol dehydrogenase, class IV (EC:1.2.1.10); K04072 acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
Iron-containing alcohol dehydrogenase n=2 Tax=Microbacterium RepID=H8E2H6_9MICO
Aldehyde-alcohol dehydrogenase {ECO:0000256|PIRNR:PIRNR000111}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
scnpilot_p_inoc_scaffold_324_curated_20
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13257..13598
DNA (342bp) protein (114aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E2H9_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KIC56970.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hypothetical protein
scnpilot_p_inoc_scaffold_324_curated_21
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13591..14070
DNA (480bp) protein (160aa)
prepilin signal peptidase PulO-like peptidase; K02654 leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
Peptidase A24A prepilin type IV n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E2I0_9MICO
Peptidase A24 {ECO:0000313|EMBL:KIC56971.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
scnpilot_p_inoc_scaffold_324_curated_22
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14104..15159
DNA (1056bp) protein (352aa)
Ribonuclease BN n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E2I1_9MICO
Ribonuclease BN {ECO:0000313|EMBL:KIC56981.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hypothetical protein; K07058 membrane protein
scnpilot_p_inoc_scaffold_324_curated_23
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15305..17746
DNA (2442bp) protein (814aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
glucan phosphorylase; K00688 starch phosphorylase [EC:2.4.1.1]
Phosphorylase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E2I2_9MICO
scnpilot_p_inoc_scaffold_324_curated_24
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17977..18708)
DNA (732bp) protein (244aa)
GMP synthase - glutamine amidotransferase domain; K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
GMP synthase-glutamine amidotransferase domain-containing protein n=2 Tax=Microbacterium RepID=H8E2I3_9MICO
GMP synthase-glutamine amidotransferase domain-containing protein {ECO:0000313|EMBL:EIC08713.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
scnpilot_p_inoc_scaffold_324_curated_25
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18705..19556)
DNA (852bp) protein (284aa)
LysR substrate-binding protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E2I4_9MICO
LysR family transcriptional regulator {ECO:0000313|EMBL:EXJ52219.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
LysR family transcriptional regulator
scnpilot_p_inoc_scaffold_324_curated_26
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19757..20692
DNA (936bp) protein (312aa)
3-hydroxyisobutyrate dehydrogenase; K00020 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
3-hydroxyisobutyrate dehydrogenase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A4J5_9MICO
3-hydroxyisobutyrate dehydrogenase {ECO:0000313|EMBL:EPD83606.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
scnpilot_p_inoc_scaffold_324_curated_27
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20732..22261
DNA (1530bp) protein (510aa)
mmsA; methylmalonate-semialdehyde dehydrogenase; K00140 malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
Methylmalonate-semialdehyde dehydrogenase n=2 Tax=Microbacterium RepID=H8E2I6_9MICO
Methylmalonate-semialdehyde dehydrogenase (Acylating) {ECO:0000313|EMBL:EPD83605.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
scnpilot_p_inoc_scaffold_324_curated_28
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22316..22543
DNA (228bp) protein (76aa)
Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain-containing protein n=2 Tax=Microbacterium RepID=H8E2I7_9MICO
Response regulator {ECO:0000313|EMBL:EXJ52216.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
scnpilot_p_inoc_scaffold_324_curated_29
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22540..23184
DNA (645bp) protein (215aa)
Adenylate cyclase n=2 Tax=Microbacterium RepID=H8E2I8_9MICO
Adenylate cyclase {ECO:0000313|EMBL:EXJ52215.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_324_curated_30
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23341..24741)
DNA (1401bp) protein (467aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component; K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4]
Dihydrolipoyl dehydrogenase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AN53_9MICO
Displaying items 1-30 of 108 in total

View Taxonomy