ggKbase home page

scnpilot_p_inoc_scaffold_2092_curated_1

Organism: scnpilot_dereplicated_Microbacterium_7

near complete RP 45 / 55 MC: 4 BSCG 45 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(3..1106)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.9
  • Coverage: 368.0
  • Bit_score: 717
  • Evalue 8.00e-204
rpoB; DNA-directed RNA polymerase, beta subunit/140 kD subunit; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 92.6
  • Coverage: 363.0
  • Bit_score: 658
  • Evalue 9.90e-187
DNA-directed RNA polymerase subunit beta n=2 Tax=Microbacterium RepID=H8E543_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 98.6
  • Coverage: 368.0
  • Bit_score: 714
  • Evalue 4.80e-203

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium sp. MRS-1 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1104
ATGGAGGTAATCCCCTTGGCTGCTGCGCGCAACGCAACCAATTCCACCACCACCCCCAAGAACGGCCGCGGCGCATCGCGCCTGTCGTTCGCCAAGATCTCCGACACGCTGACGGTCCCCGACCTTCTCGCGCTGCAGACGGAGTCCTTCGACTGGCTCGTCGGCAACGACGCCTGGAAGGCCCGCGTCGCAGAGGCGAAGGAGGCCGGTCGCACCGACGTGCCCGAGACCAGCGGCCTCGAGGAGATCTTCGAGGAGATCTCGCCCATCGAGGACCTCGGCGAGACGATGCAGCTGAGCTTCACGAACCCCTACCTCGAGCCGGAGAAGTACTCGATCGAGGAGTGCAAGGAGCGCGGCAAGACCTACGCCGCCCCGCTGTACGTCGAGGCCGAGTTCATGAACCACCTCACCGGTGAGATCAAGACCCAGACCGTCTTCATGGGCGACTTCCCCCTGCAGACCGGCAAGGGCACGTTCATCATCAACGGCACCGAGCGCGTCGTCGTCTCGCAGCTGGTCCGCAGCCCCGGCGTCTACTTCGACAAGACGCCCGACAAGACCAGCGACAAGGACATCGTCTCCGCGCGCGTCATCCCGAGCCGCGGCGCCTGGCTCGAGTTCGAGATCGACAAGCGCGACCAGGTGGGCGTGCGCATCGACCGCAAGCGCAAGCAGTCGGTCACCGTCTTCCTCAAGGCCCTCGGCCTGTCCAGCGAAGACATCCTCGCCGAGTTCGCCGGCTACGAGTCGATCGCCGACACGCTGAGCAAGGACACGATCCTCACCAAGGAGGACGCGCTCCGCGACATCTACCGCAAGCTCCGTCCGGGCGAGCAGGTCGCCGCCGAGGCCGCCCGCGCGCTGCTGGACAACTTCTACTTCAACCCGAAGCGCTACGACCTGGCGAAGGTCGGTCGGTACAAGATCAACCAGAAGCTCGGCCTCGACAAGCCGCTCAGCGACTCGGTGCTCACCGTCGACGACATCGTCGCCACGATCAAGTACCTCGTCGCCCTGCACAACGGCGACGCGACGATCCCGGGTGTCCGGGGCGGCCAGCCCGCGGAGATCCGCCTGGACGTCGACGACATCGACAACTTC
PROTEIN sequence
Length: 368
MEVIPLAAARNATNSTTTPKNGRGASRLSFAKISDTLTVPDLLALQTESFDWLVGNDAWKARVAEAKEAGRTDVPETSGLEEIFEEISPIEDLGETMQLSFTNPYLEPEKYSIEECKERGKTYAAPLYVEAEFMNHLTGEIKTQTVFMGDFPLQTGKGTFIINGTERVVVSQLVRSPGVYFDKTPDKTSDKDIVSARVIPSRGAWLEFEIDKRDQVGVRIDRKRKQSVTVFLKALGLSSEDILAEFAGYESIADTLSKDTILTKEDALRDIYRKLRPGEQVAAEAARALLDNFYFNPKRYDLAKVGRYKINQKLGLDKPLSDSVLTVDDIVATIKYLVALHNGDATIPGVRGGQPAEIRLDVDDIDNF