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scnpilot_p_inoc_scaffold_2092_curated

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2092_curated_1
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3..1106)
DNA (1104bp) protein (368aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
rpoB; DNA-directed RNA polymerase, beta subunit/140 kD subunit; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
DNA-directed RNA polymerase subunit beta n=2 Tax=Microbacterium RepID=H8E543_9MICO
scnpilot_p_inoc_scaffold_2092_curated_2
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1340..2974)
DNA (1635bp) protein (545aa)
Urea amidolyase related protein n=2 Tax=Microbacterium RepID=H8E544_9MICO
Allophanate hydrolase {ECO:0000313|EMBL:KIC59301.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
allophanate hydrolase subunit 2
scnpilot_p_inoc_scaffold_2092_curated_3
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(2968..3786)
DNA (819bp) protein (273aa)
LamB/YcsF family protein n=2 Tax=Microbacterium RepID=H8E545_9MICO
LamB/YcsF family protein {ECO:0000313|EMBL:EXJ53109.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
lactam utilization protein B; K07160 UPF0271 protein
scnpilot_p_inoc_scaffold_2092_curated_4
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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3823..4686
DNA (864bp) protein (288aa)
Spermidine synthase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E546_9MICO
Spermidine synthase {ECO:0000313|EMBL:EXJ53108.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
spermidine synthase
scnpilot_p_inoc_scaffold_2092_curated_5
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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4724..5329
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3BCW7_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ53107.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
TPR repeat
scnpilot_p_inoc_scaffold_2092_curated_6
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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5359..5868
DNA (510bp) protein (170aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E548_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ53106.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
metal-dependent hydrolase
scnpilot_p_inoc_scaffold_2092_curated_7
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(5876..6517)
DNA (642bp) protein (214aa)
2-phosphosulfolactate phosphatase {ECO:0000256|SAAS:SAAS00085834}; EC=3.1.3.71 {ECO:0000256|SAAS:SAAS00085834};; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ADW4_9MICO
phosphosulfolactate phosphohydrolase
scnpilot_p_inoc_scaffold_2092_curated_8
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6557..7087
DNA (531bp) protein (177aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E550_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD86497.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2092_curated_9
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(7176..8639)
DNA (1464bp) protein (488aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ABI5_9MICO
Peptide ABC transporter permease {ECO:0000313|EMBL:EXJ53103.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein; K02004 putative ABC transport system permease protein
scnpilot_p_inoc_scaffold_2092_curated_10
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(8636..9397)
DNA (762bp) protein (254aa)
ABC transporter related protein n=2 Tax=Microbacterium RepID=H8E552_9MICO
ABC transporter {ECO:0000313|EMBL:EXJ53102.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
ABC transporter; K02003 putative ABC transport system ATP-binding protein
scnpilot_p_inoc_scaffold_2092_curated_11
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(9491..10147)
DNA (657bp) protein (219aa)
Response regulator receiver n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E553_9MICO
Response regulator receiver {ECO:0000313|EMBL:EIC07992.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
LuxR family two component transcriptional regulator
scnpilot_p_inoc_scaffold_2092_curated_12
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(10144..11424)
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ADX1_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD86501.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
signal transduction histidine kinase
scnpilot_p_inoc_scaffold_2092_curated_13
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11493..12683)
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AWP7_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD86502.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
transcriptional regulator/sugar kinase
scnpilot_p_inoc_scaffold_2092_curated_14
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12773..14002)
DNA (1230bp) protein (410aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ABI9_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD86503.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
xylose ABC transporter permease; K10547 putative multiple sugar transport system permease protein
Displaying 14 items

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