ggKbase home page

scnpilot_p_inoc_scaffold_693_curated_29

Organism: scnpilot_dereplicated_Microbacterium_7

near complete RP 45 / 55 MC: 4 BSCG 45 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(32861..33403)

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 180.0
  • Bit_score: 381
  • Evalue 6.70e-103
def; N-formylmethionyl-tRNA deformylase; K01462 peptide deformylase [EC:3.5.1.88] similarity KEGG
DB: KEGG
  • Identity: 78.9
  • Coverage: 180.0
  • Bit_score: 315
  • Evalue 1.30e-83
Peptide deformylase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A3J4_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 180.0
  • Bit_score: 381
  • Evalue 4.80e-103

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium sp. MRS-1 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 543
ATGGGCGATCCCGTCCTGCACTCCCCCGCCGACCCGGTCTCCGAAATCACCGATGAGATCCGCACACTCGTCGCAGACATGTTCGAGACGATGGATGCCGCCCCCGGCGTCGGTCTCGCGGCCCCCCAGGTAGGGGTGGGCCTGCGCATCTACACGTACAGCTACCAAGACGATGACGGGCAGCCCTGGCGCGGAGTCATCCTCAACCCCGAACTGTGGATGCGTCCGTCGGTGCCCGGGGCACCCGACCCGGACGACGAGTCGGAGGGGTGCCTGTCGTTCCCGGGCGAGCGCTTCGCGTTGCGCCGCTCCGATGAGGTTCTGGTCACCGGCATCGATCTCGACGGTGAGCCGATCCGCATCCAGGTCGATGGCTGGCGCGCGCGCATCATGCAGCACGAGTTCGACCACCTCGACGGCATCCTGTATGTGGACCGCCTGGACGACGGTGACTGGAAGACCGTCCAGAAGATCGCCCGCAAGCGCGGCTGGGGTCGTCCTGGGGCGTCCTGGACGCCGGGAATCGACGATCTCGACGCCTGA
PROTEIN sequence
Length: 181
MGDPVLHSPADPVSEITDEIRTLVADMFETMDAAPGVGLAAPQVGVGLRIYTYSYQDDDGQPWRGVILNPELWMRPSVPGAPDPDDESEGCLSFPGERFALRRSDEVLVTGIDLDGEPIRIQVDGWRARIMQHEFDHLDGILYVDRLDDGDWKTVQKIARKRGWGRPGASWTPGIDDLDA*