ggKbase home page

scnpilot_p_inoc_scaffold_693_curated

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_693_curated_1
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..912
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A2J0_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD83248.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
membrane metal-binding protein; K02238 competence protein ComEC
scnpilot_p_inoc_scaffold_693_curated_2
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

965..2011
DNA (1047bp) protein (349aa)
DNA polymerase III, delta subunit; K02340 DNA polymerase III subunit delta [EC:2.7.7.7]
DNA polymerase III, delta subunit n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3B3Z2_9MICO
DNA polymerase III, delta subunit {ECO:0000313|EMBL:EPD83249.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
scnpilot_p_inoc_scaffold_693_curated_3
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(2213..2563)
DNA (351bp) protein (117aa)
30S ribosomal protein S20 n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E324_9MICO
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
rpsT; ribosomal protein S20; K02968 small subunit ribosomal protein S20
scnpilot_p_inoc_scaffold_693_curated_4
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2691..3986
DNA (1296bp) protein (432aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A3H1_9MICO
MFS transporter permease {ECO:0000313|EMBL:EXJ52877.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
permease of the major facilitator superfamily
scnpilot_p_inoc_scaffold_693_curated_5
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3916..4659)
DNA (744bp) protein (248aa)
Hydrolase or acyltransferase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E326_9MICO
Hydrolase or acyltransferase {ECO:0000313|EMBL:EIC08576.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hydrolase or acyltransferase
scnpilot_p_inoc_scaffold_693_curated_6
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4768..9504)
DNA (4737bp) protein (1579aa)
5'-Nucleotidase domain-containing protein; K01081 5'-nucleotidase [EC:3.1.3.5]
LPXTG-motif cell wall anchor domain protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E327_9MICO
5'-nucleotidase {ECO:0000313|EMBL:EXJ52879.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
scnpilot_p_inoc_scaffold_693_curated_7
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9835..11685
DNA (1851bp) protein (617aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
Elongation factor 4 n=2 Tax=Microbacterium RepID=H8E328_9MICO
lepA; membrane GTPase LepA; K03596 GTP-binding protein LepA
scnpilot_p_inoc_scaffold_693_curated_8
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11714..12364
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A9N7_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD83255.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
hypothetical protein
scnpilot_p_inoc_scaffold_693_curated_9
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12364..13581
DNA (1218bp) protein (406aa)
hemN; coproporphyrinogen III oxidase; K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22]
Oxygen-independent coproporphyrinogen III oxidase n=2 Tax=Microbacterium RepID=H8E330_9MICO
Oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:EIC08580.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
scnpilot_p_inoc_scaffold_693_curated_10
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13640..14677
DNA (1038bp) protein (346aa)
Heat-inducible transcription repressor hrcA n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AM38_9MICO
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081, ECO:0000256|SAAS:SAAS00101987}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
transcriptional regulator of heat shock gene; K03705 heat-inducible transcriptional repressor
scnpilot_p_inoc_scaffold_693_curated_11
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14730..15839
DNA (1110bp) protein (370aa)
Chaperone protein DnaJ n=2 Tax=Microbacterium RepID=H8E332_9MICO
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
dnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain; K03686 molecular chaperone DnaJ
scnpilot_p_inoc_scaffold_693_curated_12
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15841..16593
DNA (753bp) protein (251aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein; K09761 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E333_9MICO
scnpilot_p_inoc_scaffold_693_curated_13
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16617..16964
DNA (348bp) protein (116aa)
Histidine triad (HIT) protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E334_9MICO
Histidine triad (HIT) protein {ECO:0000313|EMBL:EIC08584.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase; K02503 Hit-like protein involved in cell-cycle regulation
scnpilot_p_inoc_scaffold_693_curated_14
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16957..18099
DNA (1143bp) protein (381aa)
PhoH family protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E335_9MICO
PhoH family protein {ECO:0000313|EMBL:EIC08585.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
phoH; phosphate starvation-inducible protein PhoH, ATPase; K06217 phosphate starvation-inducible protein PhoH and related proteins
scnpilot_p_inoc_scaffold_693_curated_15
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18096..18563
DNA (468bp) protein (156aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; Flags: Precursor;; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
Endoribonuclease YbeY n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E336_9MICO
metal-dependent hydrolase; K07042 probable rRNA maturation factor
scnpilot_p_inoc_scaffold_693_curated_16
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18560..19879
DNA (1320bp) protein (440aa)
CBS domain containing protein n=2 Tax=Microbacterium RepID=H8E337_9MICO
CBS domain containing protein {ECO:0000313|EMBL:EIC08587.1}; Flags: Precursor;; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hemolysins
scnpilot_p_inoc_scaffold_693_curated_17
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19876..20778
DNA (903bp) protein (301aa)
GTPase Era n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E338_9MICO
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
era; GTPase; K03595 GTP-binding protein Era
scnpilot_p_inoc_scaffold_693_curated_18
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20780..21727
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A9P4_9MICO
Alcohol dehydrogenase {ECO:0000313|EMBL:EXJ52891.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
NADPH:quinone reductase
scnpilot_p_inoc_scaffold_693_curated_19
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21890..23650
DNA (1761bp) protein (587aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
leuA; isopropylmalate/homocitrate/citramalate synthase; K01649 2-isopropylmalate synthase [EC:2.3.3.13]
2-isopropylmalate synthase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A3I3_9MICO
scnpilot_p_inoc_scaffold_693_curated_20
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23744..24430)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AM48_9MICO
Membrane protein {ECO:0000313|EMBL:EXJ52893.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_693_curated_21
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24486..25214
DNA (729bp) protein (243aa)
DNA repair protein RecO n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A2K9_9MICO
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
recO; recombinational DNA repair protein; K03584 DNA repair protein RecO (recombination protein O)
scnpilot_p_inoc_scaffold_693_curated_22
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25211..26026
DNA (816bp) protein (272aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
uppS; undecaprenyl pyrophosphate synthase; K00806 undecaprenyl diphosphate synthase [EC:2.5.1.31]
Isoprenyl transferase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E343_9MICO
scnpilot_p_inoc_scaffold_693_curated_23
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26056..26721
DNA (666bp) protein (222aa)
DSBA oxidoreductase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E344_9MICO
DSBA oxidoreductase {ECO:0000313|EMBL:EXJ52896.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
dithiol-disulfide isomerase
scnpilot_p_inoc_scaffold_693_curated_24
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26782..27285)
DNA (504bp) protein (168aa)
glutathione peroxidase; K00432 glutathione peroxidase [EC:1.11.1.9]
Glutathione peroxidase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A3I9_9MICO
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
scnpilot_p_inoc_scaffold_693_curated_25
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27348..28514
DNA (1167bp) protein (389aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
tRNA-dihydrouridine synthase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E346_9MICO
nifR3; tRNA-dihydrouridine synthase
scnpilot_p_inoc_scaffold_693_curated_26
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28504..29892
DNA (1389bp) protein (463aa)
dgt; dGTP triphosphohydrolase; K01129 dGTPase [EC:3.1.5.1]
Deoxyguanosinetriphosphate triphosphohydrolase-like protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A2L1_9MICO
Deoxyguanosinetriphosphate triphosphohydrolase-like protein {ECO:0000256|HAMAP-Rule:MF_01212}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
scnpilot_p_inoc_scaffold_693_curated_27
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29892..31787
DNA (1896bp) protein (632aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
DNA primase; K02316 DNA primase [EC:2.7.7.-]
DNA primase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E348_9MICO
scnpilot_p_inoc_scaffold_693_curated_28
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31856..32626
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A9Q1_9MICO
Peptide ABC transporter ATPase {ECO:0000313|EMBL:EXJ52901.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
oligopeptide ABC transporter ATPase
scnpilot_p_inoc_scaffold_693_curated_29
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32861..33403)
DNA (543bp) protein (181aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
def; N-formylmethionyl-tRNA deformylase; K01462 peptide deformylase [EC:3.5.1.88]
Peptide deformylase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A3J4_9MICO
scnpilot_p_inoc_scaffold_693_curated_30
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33470..34537
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AM57_9MICO
Exporter DMT family membrane protein {ECO:0000313|EMBL:EXJ52903.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
permease of the drug/metabolite transporter (DMT) superfamily
Displaying items 1-30 of 47 in total

View Taxonomy