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scnpilot_p_inoc_scaffold_1021_curated_5

Organism: scnpilot_dereplicated_Microbacterium_7

near complete RP 45 / 55 MC: 4 BSCG 45 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(4268..5911)

Top 3 Functional Annotations

Value Algorithm Source
GAF modulated sigma54 specific transcriptional regulator, Fis family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D236_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 34.1
  • Coverage: 572.0
  • Bit_score: 245
  • Evalue 1.20e-61
Fis family transcriptional regulator {ECO:0000313|EMBL:CQD23916.1}; TaxID=141349 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium lentiflavum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 35.9
  • Coverage: 568.0
  • Bit_score: 271
  • Evalue 3.00e-69
Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 34.1
  • Coverage: 572.0
  • Bit_score: 245
  • Evalue 3.90e-62

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Taxonomy

Mycobacterium lentiflavum → Mycobacterium → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1644
ATGTCTTGGTTGCGTTCCCGGGCGTGGGGGGTGGAGCCGAGCGCCGGCGGACGCTTCGTCGGGTTCGAGGGTTCGCGGTCCCGGCTCATGCGGGCAGCGGGACGCGTGTTGGATGCGGTCATGGAGGATCTCGGAGAGCTCGACGTCAGCGTGATCCTGGCGGATAGTGATGCTCGGGTCATCGATCGCCGGACCGGCGACAGGCGTTTGACGCGCCTGCTGGATCGGGTCGACATGGCGCCCGGGTTCGTGTTCTCCGAGGAGGTCTGCGGCACCAACGGGCTGGGCACGCCGATCGAGACTGGGCAGCTTGTGAAGGTCGGTGGTCACGAGCACTTCATCGATGGTTTCGTCGAGTTCAGCTGCATCGGGGCGCCAATCACGGACGGCGTCTCGAAGCGGGTCGTCGGTGTCATTGATGTGACCACGTCGGCGGATTCCGGTGGCGAGGCGGCCGGGGGGCTGCTGGCGCGGCAGCTTGCGAAGGCGATCGAGGCCGAACTGCGCCGCCAGCGCTTCCGCGGCGAGCACCGATTGCTCGATCACTATCTCGAGGAGACGTCTCGAACCCGAGGGGCGGTCGTGGCGATCGGCGAACGGCTCGTGATCTCAAACGCTGCCGCCGCCCAGCTGCTGTGGTCCTCGGATCTCAAACGTCTTCGCGACCGTGCGCTCTGGGCCACGTCTCAAGCGCGCTCGGCCGAAGCAGACGGCGCCGATGCGGGTATCACCAGCACGTCCTACGCCGATGTCGACGGCCACACCGTGGGCGCCGTCTTCAGGATGGCGGCGACCGAACGACACGTGGCCAGTCGTGTTCCTCACGGCACCGATCACGCCCTCCCGGCGAGCGATGTCGGGCTGGTAGGTGCGCATCAAGATTTCCTCGCCGCCTATCAGATGACGGCGACGGCATCGCCGCAGGTCGTGACAGCGCTGGTCGGTGAGCCTGGCAGCGGGAAGCATGCGCTCGCGCTGGCGGGAGCGCACGCGGCCGGAATGCAGGCGACAACCATCGACTGCGCCGTCGAGGAGGCGCGGCACCTGCAGGCGGAGCTGAAGAACCGAACCGACCTCTCGGAGGCCGTGATCTTCCGCCATGTCAATTCCCCCGGCGCCGCGTCCGCGCCGTCGTATGCCGCGGTGGTGCGTGATGCCGTGGAGTCGGGTAAGCGAGTGTTCCTGACCTTCGCCACCGAGCCGGGCTGGGGCCCCGGACTGCTCCCGGACGTGGACGTGGTCACCGTCCCCGTGCCGGCGCTGCGCGAGCGCGCAAGCGATATCCCGGTATTGGCCCGTCACCTCGCGGCCGGGCGTGACATCACCGACGCCGCCGTGCGCGTGCTGCAACGCGCCCTGTGGCCAGGGAATATCCGTGAACTCGAACAGATCGTCTCCGCCATGACACGAGACAACCCCGGTGACTCACCGCTGGACGTGGAGCATATCCCCGTGGGGTTGCGGCGCTTCATCCCGCACCGGCCGTTGACTCGCCTGGAGCGGGCGGAGCTCATGGCGATCTTGGATGCGCTCGCCGCGACCGGCTCGAAGAAGGCCGCTGCCCGTGACTTGGGGTTGTCCCGCTCCACGCTCTACCGGCGCCTGCTTCAGTACGGCGTCGATCTCGATGTCCGGCAGCTGTGA
PROTEIN sequence
Length: 548
MSWLRSRAWGVEPSAGGRFVGFEGSRSRLMRAAGRVLDAVMEDLGELDVSVILADSDARVIDRRTGDRRLTRLLDRVDMAPGFVFSEEVCGTNGLGTPIETGQLVKVGGHEHFIDGFVEFSCIGAPITDGVSKRVVGVIDVTTSADSGGEAAGGLLARQLAKAIEAELRRQRFRGEHRLLDHYLEETSRTRGAVVAIGERLVISNAAAAQLLWSSDLKRLRDRALWATSQARSAEADGADAGITSTSYADVDGHTVGAVFRMAATERHVASRVPHGTDHALPASDVGLVGAHQDFLAAYQMTATASPQVVTALVGEPGSGKHALALAGAHAAGMQATTIDCAVEEARHLQAELKNRTDLSEAVIFRHVNSPGAASAPSYAAVVRDAVESGKRVFLTFATEPGWGPGLLPDVDVVTVPVPALRERASDIPVLARHLAAGRDITDAAVRVLQRALWPGNIRELEQIVSAMTRDNPGDSPLDVEHIPVGLRRFIPHRPLTRLERAELMAILDALAATGSKKAAARDLGLSRSTLYRRLLQYGVDLDVRQL*