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scnpilot_p_inoc_scaffold_1021_curated

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1021_curated_1
Arthrobacter sp. SPG23, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..286
DNA (285bp) protein (95aa)
aldehyde dehydrogenase (EC:1.2.1.-); K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16]
6-oxohexanoate dehydrogenase n=2 Tax=Rhodococcus wratislaviensis RepID=K7XBT9_9NOCA
SPG23_c17, whole genome shotgun sequence {ECO:0000313|EMBL:KIS27442.1}; TaxID=1610703 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. SPG23.;"
scnpilot_p_inoc_scaffold_1021_curated_2
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

636..2258
DNA (1623bp) protein (541aa)
cyclohexanone monooxygenase (EC:1.14.13.22); K03379 cyclohexanone monooxygenase [EC:1.14.13.22]
Cyclohexanone monooxygenase n=1 Tax=Rhodococcus opacus M213 RepID=K8XKW0_RHOOP
Cyclohexanone monooxygenase {ECO:0000313|EMBL:EKT82268.1}; TaxID=1129896 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus M213.;"
scnpilot_p_inoc_scaffold_1021_curated_3
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2312..3211
DNA (900bp) protein (300aa)
Hydrolase n=1 Tax=Rhodococcus opacus M213 RepID=K8XLH4_RHOOP
Esterase {ECO:0000313|EMBL:AII03310.1}; TaxID=37919 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (Nocardia opaca).;"
hydrolase
scnpilot_p_inoc_scaffold_1021_curated_4
Cryobacterium sp. MLB-32, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3426..4271)
DNA (846bp) protein (282aa)
antibiotic biosynthesis monooxygenase n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B5C391
Uncharacterized protein {ECO:0000313|EMBL:KFF59141.1}; TaxID=1529318 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium sp. MLB-32.;"
antibiotic biosynthesis monooxygenase
scnpilot_p_inoc_scaffold_1021_curated_5
Mycobacterium lentiflavum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4268..5911)
DNA (1644bp) protein (548aa)
GAF modulated sigma54 specific transcriptional regulator, Fis family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D236_PSEUX
Fis family transcriptional regulator {ECO:0000313|EMBL:CQD23916.1}; TaxID=141349 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium lentiflavum.;"
Fis family transcriptional regulator
scnpilot_p_inoc_scaffold_1021_curated_6
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6321..7379
DNA (1059bp) protein (353aa)
Alcohol dehydrogenase {ECO:0000313|EMBL:KJL37358.1}; EC=1.1.1.1 {ECO:0000313|EMBL:KJL37358.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
alcohol dehydrogenase; K00001 alcohol dehydrogenase [EC:1.1.1.1]
Alcohol dehydrogenase GroES domain protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E9M2_9MICO
scnpilot_p_inoc_scaffold_1021_curated_7
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7553..8401)
DNA (849bp) protein (283aa)
3-hydroxyacyl-CoA dehydrogenase; K00074 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E9M1_9MICO
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein {ECO:0000313|EMBL:EIC06369.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
scnpilot_p_inoc_scaffold_1021_curated_8
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8398..9150)
DNA (753bp) protein (251aa)
paaF; putative enoyl-CoA hydratase PaaF (EC:4.2.1.17)
Enoyl-CoA hydratase/isomerase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E9M0_9MICO
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:EIC06368.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
scnpilot_p_inoc_scaffold_1021_curated_9
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9236..10960)
DNA (1725bp) protein (575aa)
Helix-turn-helix Fis-type n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E9L8_9MICO
Acetoin dehydrogenase operon transcriptional activator AcoR {ECO:0000313|EMBL:KJL37362.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
Fis family transcriptional regulator
scnpilot_p_inoc_scaffold_1021_curated_10
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11028..11471)
DNA (444bp) protein (148aa)
Thioesterase superfamily protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E9L7_9MICO
Thioesterase superfamily protein {ECO:0000313|EMBL:EIC06365.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
thioesterase superfamily protein
scnpilot_p_inoc_scaffold_1021_curated_11
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11532..13145)
DNA (1614bp) protein (538aa)
Cyclohexanone 1,2-monooxygenase {ECO:0000313|EMBL:KJL37364.1}; EC=1.14.13.22 {ECO:0000313|EMBL:KJL37364.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E9L6_9MICO
cyclohexanone monooxygenase
scnpilot_p_inoc_scaffold_1021_curated_12
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13189..14100)
DNA (912bp) protein (304aa)
Monoterpene epsilon-lactone hydrolase {ECO:0000313|EMBL:KJL37365.1}; EC=3.1.1.83 {ECO:0000313|EMBL:KJL37365.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
Alpha/beta hydrolase fold-3 n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E9L5_9MICO
alpha/beta hydrolase
scnpilot_p_inoc_scaffold_1021_curated_13
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14493..15209)
DNA (717bp) protein (239aa)
Oxidoreductase, short-chain dehydrogenase/reductase family n=2 Tax=Geobacter sulfurreducens RepID=D7AGR7_GEOSK
short chain dehydrogenase
Short-chain dehydrogenase {ECO:0000313|EMBL:AJY70545.1}; TaxID=35554 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurreducens.;"
scnpilot_p_inoc_scaffold_1021_curated_14
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15272..16174)
DNA (903bp) protein (301aa)
FAD linked oxidase domain protein n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A698_CELGA
FAD linked oxidase domain protein
FAD linked oxidase domain protein {ECO:0000313|EMBL:AEI12254.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
scnpilot_p_inoc_scaffold_1021_curated_15
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16200..16520)
DNA (321bp) protein (107aa)
ferredoxin n=1 Tax=Microbacterium barkeri RepID=UPI0002E6569C
Ferredoxin {ECO:0000313|EMBL:EQM78628.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
ferredoxin
scnpilot_p_inoc_scaffold_1021_curated_16
Brachybacterium faecium, Brachybacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16606..17070
DNA (465bp) protein (155aa)
MerR family transcriptional regulator n=1 Tax=Brachybacterium paraconglomeratum RepID=UPI00026C7299
redox-sensitive transcriptional activator SoxR; K13639 MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
Redox-sensitive transcriptional activator SoxR {ECO:0000313|EMBL:ACU83910.1}; TaxID=446465 species="Bacteria; Actinobacteria; Micrococcales; Dermabacteraceae; Brachybacterium.;" source="Brachybacterium faecium (strain ATCC 43885 / DSM 4810 / NCIB 9860).;"
scnpilot_p_inoc_scaffold_1021_curated_17
Bifidobacterium mongoliense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17160..17759
DNA (600bp) protein (200aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=1437603 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium mongoliense DSM 21395.;"
Superoxide dismutase (EC:1.15.1.1); K04564 superoxide dismutase, Fe-Mn family [EC:1.15.1.1]
superoxide dismutase n=1 Tax=Agromyces italicus RepID=UPI0003B5157B
scnpilot_p_inoc_scaffold_1021_curated_18
Gordonia araii, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17830..18441
DNA (612bp) protein (204aa)
Putative NADPH-flavin oxidoreductase n=1 Tax=Gordonia araii NBRC 100433 RepID=G7H403_9ACTO
Putative NADPH-flavin oxidoreductase {ECO:0000313|EMBL:GAB10578.1}; TaxID=1073574 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia araii NBRC 100433.;"
scnpilot_p_inoc_scaffold_1021_curated_19
Leucobacter sp. UCD-THU, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18438..19952
DNA (1515bp) protein (505aa)
major facilitator transporter n=1 Tax=Leucobacter sp. UCD-THU RepID=UPI00037A0188
Major facilitator transporter {ECO:0000313|EMBL:EYT53256.1}; TaxID=1292023 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter sp. UCD-THU.;"
permease of the major facilitator superfamily
scnpilot_p_inoc_scaffold_1021_curated_20
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19888..21879)
DNA (1992bp) protein (664aa)
putative helicase (EC:3.6.1.-)
DNA/RNA helicase, superfamily II, SNF2 family n=1 Tax=Frankia sp. QA3 RepID=I9KCP7_9ACTO
Micromonospora carbonacea strain JXNU-1 contig1, whole genome shotgun sequence {ECO:0000313|EMBL:KIR65322.1}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
scnpilot_p_inoc_scaffold_1021_curated_21
Scytonema tolypothrichoides, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

22109..22768
DNA (660bp) protein (220aa)
Uncharacterized protein {ECO:0000313|EMBL:KIJ79989.1}; TaxID=1233231 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema tolypothrichoides VB-61278.;"
scnpilot_p_inoc_scaffold_1021_curated_22
Arthrobacter phenanthrenivorans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22856..23992)
DNA (1137bp) protein (379aa)
Phospholipase/Carboxylesterase n=1 Tax=Arthrobacter phenanthrenivorans (strain DSM 18606 / JCM 16027 / LMG 23796 / Sphe3) RepID=F0M3U0_ARTPP
phospholipase/carboxylesterase
Phospholipase/Carboxylesterase {ECO:0000313|EMBL:ADX73375.1}; Flags: Precursor;; TaxID=930171 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter phenanthrenivorans (strain DSM 18606 / JCM 16027 / LMG; 23796 / Sphe3).;"
scnpilot_p_inoc_scaffold_1021_curated_23
Tetrasphaera jenkinsii, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23992..25011)
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Arthrobacter phenanthrenivorans (strain DSM 18606 / JCM 16027 / LMG 23796 / Sphe3) RepID=F0M3U1_ARTPP
Uncharacterized protein {ECO:0000313|EMBL:CCI52298.1}; TaxID=1193518 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera jenkinsii Ben 74.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1021_curated_24
BJP_IG2157_Actinomycetales_63_19, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(25008..25496)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Arthrobacter phenanthrenivorans (strain DSM 18606 / JCM 16027 / LMG 23796 / Sphe3) RepID=F0M3U2_ARTPP
hypothetical protein
Tax=BJP_IG2157_Actinomycetales_63_19
scnpilot_p_inoc_scaffold_1021_curated_25
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25530..25961)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Arthrobacter phenanthrenivorans (strain DSM 18606 / JCM 16027 / LMG 23796 / Sphe3) RepID=F0M3U3_ARTPP
Uncharacterized protein {ECO:0000313|EMBL:EWT05497.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1021_curated_26
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26289..27224
DNA (936bp) protein (312aa)
DNA primase n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B5047F
Uncharacterized protein {ECO:0000313|EMBL:KJL29686.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1021_curated_27
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27221..27862
DNA (642bp) protein (214aa)
excisionase n=1 Tax=Glaciibacter superstes RepID=UPI0003B68A71
Uncharacterized protein {ECO:0000313|EMBL:KJL29685.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1021_curated_28
unknown

Not on your lists

27859..28299
DNA (441bp) protein (147aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1021_curated_29
Leucobacter sp. UCD-THU, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28307..29137
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B50B2B
Uncharacterized protein {ECO:0000313|EMBL:EYT55767.1}; TaxID=1292023 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter sp. UCD-THU.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1021_curated_30
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29142..30131
DNA (990bp) protein (330aa)
chromosome partitioning protein ParB n=1 Tax=Glaciibacter superstes RepID=UPI0003B6D141
ParB domain protein nuclease {ECO:0000313|EMBL:EIC06911.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
ParB-like nuclease; K03497 chromosome partitioning protein, ParB family
Displaying items 1-30 of 35 in total

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