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scnpilot_p_inoc_scaffold_1972_curated_1

Organism: scnpilot_dereplicated_Microbacterium_7

near complete RP 45 / 55 MC: 4 BSCG 45 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(3..230)

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 76.0
  • Bit_score: 160
  • Evalue 1.30e-36
leuC; 3-isopropylmalate dehydratase large subunit; K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] similarity KEGG
DB: KEGG
  • Identity: 95.9
  • Coverage: 74.0
  • Bit_score: 151
  • Evalue 1.10e-34
3-isopropylmalate dehydratase large subunit n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ALH7_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 98.7
  • Coverage: 76.0
  • Bit_score: 158
  • Evalue 2.80e-36

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Taxonomy

Microbacterium hominis → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 228
ATGAGCACAACGATTCCCGACCGCCCGCGGACCCTCGCCGAGAAGGTCTGGGACGACCACCTCGTGGTGAAGGGCGAAGACGGGCAGCCCGACCTCATCTACATCGACCTGCACCTCGTCCACGAGGTGACCAGCCCCCAGGCATTTGATGGTCTGCGCGCCGAGGGTCGTCCGGTGCGGCGGCTCGATCTGACGATCGCGACCGAGGACCACAACACGCCCACGCTC
PROTEIN sequence
Length: 76
MSTTIPDRPRTLAEKVWDDHLVVKGEDGQPDLIYIDLHLVHEVTSPQAFDGLRAEGRPVRRLDLTIATEDHNTPTL