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scnpilot_p_inoc_scaffold_1972_curated

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1972_curated_1
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3..230)
DNA (228bp) protein (76aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
leuC; 3-isopropylmalate dehydratase large subunit; K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
3-isopropylmalate dehydratase large subunit n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ALH7_9MICO
scnpilot_p_inoc_scaffold_1972_curated_2
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(381..1379)
DNA (999bp) protein (333aa)
Integral membrane protein, TerC family n=2 Tax=Microbacterium RepID=H8E4C1_9MICO
Tellurium resistance protein TerC {ECO:0000313|EMBL:EXJ52705.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein; K05794 tellurite resistance protein TerC
scnpilot_p_inoc_scaffold_1972_curated_3
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1601..2164
DNA (564bp) protein (188aa)
RNA polymerase sigma factor n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A929_9MICO
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; K03088 RNA polymerase sigma-70 factor, ECF subfamily
scnpilot_p_inoc_scaffold_1972_curated_4
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2161..3273
DNA (1113bp) protein (371aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E4B9_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ52703.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1972_curated_5
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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3534..4172
DNA (639bp) protein (213aa)
Zn-dependent hydrolase of the beta-lactamase fold-containing protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E4B8_9MICO
Beta-lactamase {ECO:0000313|EMBL:EXJ52689.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
ABC transporter ATP-binding protein
scnpilot_p_inoc_scaffold_1972_curated_6
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4244..4516)
DNA (273bp) protein (91aa)
Phosphocarrier protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ALH4_9MICO
Phosphotransferase {ECO:0000313|EMBL:EXJ52688.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
phosphotransferase system, HPr-related protein; K11189 phosphocarrier protein
scnpilot_p_inoc_scaffold_1972_curated_7
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(4558..6597)
DNA (2040bp) protein (680aa)
fruA; phosphotransferase system, fructose-specific IIC component; K02768 PTS system, fructose-specific IIA component [EC:2.7.1.69]; K02769 PTS system, fructose-specific IIB component [EC:2.7.1.69]; K02770 PTS system, fructose-specific IIC component
PTS system, Fru family, IIC component n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A2X4_9MICO
PTS system, Fru family, IIC component {ECO:0000313|EMBL:EPD83061.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
scnpilot_p_inoc_scaffold_1972_curated_8
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(6635..7582)
DNA (948bp) protein (316aa)
1-phosphofructokinase n=2 Tax=Microbacterium RepID=H8E4B5_9MICO
1-phosphofructokinase {ECO:0000313|EMBL:EIC08164.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
fruK; 1-phosphofructokinase rbh
scnpilot_p_inoc_scaffold_1972_curated_9
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(7579..8361)
DNA (783bp) protein (261aa)
Regulatory protein DeoR n=2 Tax=Microbacterium RepID=H8E4B4_9MICO
Regulatory protein DeoR {ECO:0000313|EMBL:EIC08163.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
transcriptional regulator of sugar metabolism; K03436 DeoR family transcriptional regulator, fructose operon transcriptional repressor
scnpilot_p_inoc_scaffold_1972_curated_10
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8508..9281)
DNA (774bp) protein (258aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E4B3_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KIC57635.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1972_curated_11
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9417..11456
DNA (2040bp) protein (680aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E4B2_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD83057.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1972_curated_12
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11483..13003
DNA (1521bp) protein (507aa)
Phosphoesterase PA-phosphatase related protein n=2 Tax=Microbacterium RepID=H8E4B1_9MICO
Phosphoesterase {ECO:0000313|EMBL:KIC57777.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
PAP2 superfamily protein
scnpilot_p_inoc_scaffold_1972_curated_13
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13137..13787
DNA (651bp) protein (217aa)
PBS lyase heat domain-containing protein repeat-containing protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E4A7_9MICO
PBS lyase heat domain-containing protein repeat-containing protein {ECO:0000313|EMBL:KIC57637.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1972_curated_14
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13772..15244)
DNA (1473bp) protein (491aa)
Glycosyl transferase family 39 n=2 Tax=Microbacterium RepID=H8E4A6_9MICO
4-amino-4-deoxy-L-arabinose transferase {ECO:0000313|EMBL:KIC57638.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
4-amino-4-deoxy-L-arabinose transferase
Displaying 14 items

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