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scnpilot_p_inoc_scaffold_1972_curated_3

Organism: scnpilot_dereplicated_Microbacterium_7

near complete RP 45 / 55 MC: 4 BSCG 45 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 1601..2164

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A929_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 96.8
  • Coverage: 187.0
  • Bit_score: 347
  • Evalue 8.00e-93
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 187.0
  • Bit_score: 358
  • Evalue 6.30e-96
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 59.9
  • Coverage: 172.0
  • Bit_score: 204
  • Evalue 2.60e-50

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Taxonomy

Microbacterium sp. MRS-1 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 564
ATGACCGACCACTCCGGCCTGCGCACCGACGCGGAGCTGGTCGCGGCCGCGGCCGCGGGCAGCGACCTCGCCTTCCGTACGCTCTATCGCTCCTACGTGCGCGCCGTCTACGCCGTGGCGCACGCGCTGGTGGGCACGGCGACCGATGCCGAGGACGTCACGCAGGAGACGTTCCTCGTGGCGTGGCGCAAGATCGGTGGGCTGCAGCTGGAGAGCGAATCCCTCCTGCCGTGGCTCGTCACCATCTGCCGCTTCCAGGCCGCGAACCGCGTCCGGCGTCAGAAGCGCGACCGCGAGCACCTGGCGACAGGAGTCGACGAGACCCTTCCGGCGACGATCGATGTCGAGCGTGCGGTCATCGACGCCGACCTCGCCGATCGGATCGCGGCTCAGCTGTCGACGCTCGGCGAACTGGATCAGGAGATCTTCCGCCTGTGCGCGGCCGAGGGCTACGGCTACCGCGAAGCCGCCGACCGACTCGGCGTCAGTCATGGTGCGGTCCGAAACCGCCTCTCCCGCATCCGCAGCTCGCTGCGCACCACCATCACCTCGGAGGGGTCATGA
PROTEIN sequence
Length: 188
MTDHSGLRTDAELVAAAAAGSDLAFRTLYRSYVRAVYAVAHALVGTATDAEDVTQETFLVAWRKIGGLQLESESLLPWLVTICRFQAANRVRRQKRDREHLATGVDETLPATIDVERAVIDADLADRIAAQLSTLGELDQEIFRLCAAEGYGYREAADRLGVSHGAVRNRLSRIRSSLRTTITSEGS*