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scnpilot_p_inoc_scaffold_1132_curated_4

Organism: scnpilot_dereplicated_Microbacterium_7

near complete RP 45 / 55 MC: 4 BSCG 45 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 1156..1779

Top 3 Functional Annotations

Value Algorithm Source
LysR substrate-binding protein n=2 Tax=Microbacterium RepID=H8E6W8_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 90.3
  • Coverage: 207.0
  • Bit_score: 360
  • Evalue 1.00e-96
LysR substrate-binding protein {ECO:0000313|EMBL:EIC07404.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.3
  • Coverage: 207.0
  • Bit_score: 360
  • Evalue 1.40e-96
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 43.8
  • Coverage: 210.0
  • Bit_score: 168
  • Evalue 1.80e-39

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Taxonomy

Microbacterium laevaniformans → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 624
GTGCAGTCGACGGTGTCGGCCGGCATCCAGACTCTCGAGCAGCGCATGGGAACCCGGCTTATCGAACGCTCCGGCCGCCGCGTCGCGCTCACCGCCGCCGGCGAGCAGCTGCTGGAGCCCGCTCGGGAGATCGTCGACGCGACGAGCCGATTGCAGAGCGCGGCGACCGGTCGCGTCGAGGGGCTGCTGCGGGTCGGCATCTTCGTCAACCTCCCGACGCTGCGCATGCCGGAGCTGTTCGCCGCCTTCCGCGCCGAGCACCCGCTCGTCCGCCTGCGCCTGATCTCCTCTCCCTCCGGCTCCACCGGCCTCGCCGACGAGCTGCGGCGGGGACGGATCGACCTCGCCTTCATGGGGCTGCCGTCCGCGGAGCTGCCCGACCTCGAGACCGTCGAGCTGGTGCGCTCCGCCTTCGTCGCACTGCTGCCAGACGACCATCCGCTCAGCGGGTCGCCGGAGATCACCCTCGAGAGCCTGGCGCCGCAGCCGTGGATCGACGCGCCGCACGGCTTCGGCCATCGCGTCCTCATCGAGCGCGCGCTCGCCCGCGCCGGGCTGGTGCGCGAGGTGGCGACCGAGGTCTCCGCCGTCGGCGACATCCCCGCGTTCGTCGCGGCCGGATGA
PROTEIN sequence
Length: 208
VQSTVSAGIQTLEQRMGTRLIERSGRRVALTAAGEQLLEPAREIVDATSRLQSAATGRVEGLLRVGIFVNLPTLRMPELFAAFRAEHPLVRLRLISSPSGSTGLADELRRGRIDLAFMGLPSAELPDLETVELVRSAFVALLPDDHPLSGSPEITLESLAPQPWIDAPHGFGHRVLIERALARAGLVREVATEVSAVGDIPAFVAAG*