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scnpilot_p_inoc_scaffold_1132_curated

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Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1132_curated_1
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(26..196)
DNA (171bp) protein (57aa)
50S ribosomal protein L33 n=3 Tax=Microbacterium RepID=H8E6X1_9MICO
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
rpmG; ribosomal protein L33; K02913 large subunit ribosomal protein L33
scnpilot_p_inoc_scaffold_1132_curated_2
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(196..432)
DNA (237bp) protein (79aa)
50S ribosomal protein L28 n=3 Tax=Microbacterium RepID=H8E6X0_9MICO
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
rpmB; ribosomal protein L28; K02902 large subunit ribosomal protein L28
scnpilot_p_inoc_scaffold_1132_curated_3
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(644..1093)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A7B0_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ51773.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
putative MFS transporter
scnpilot_p_inoc_scaffold_1132_curated_4
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1156..1779
DNA (624bp) protein (208aa)
LysR substrate-binding protein n=2 Tax=Microbacterium RepID=H8E6W8_9MICO
LysR substrate-binding protein {ECO:0000313|EMBL:EIC07404.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
LysR family transcriptional regulator
scnpilot_p_inoc_scaffold_1132_curated_5
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1786..2457)
DNA (672bp) protein (224aa)
Putative 3-methyladenine DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097343}; EC=3.2.2.- {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097340};; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
3-methyladenine DNA glycosylase; K03652 DNA-3-methyladenine glycosylase [EC:3.2.2.21]
Putative 3-methyladenine DNA glycosylase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3B7A7_9MICO
scnpilot_p_inoc_scaffold_1132_curated_6
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2454..3878)
DNA (1425bp) protein (475aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E6W6_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KIC58723.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1132_curated_7
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3868..4599)
DNA (732bp) protein (244aa)
TIGR03943 family protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AQN3_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ51768.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1132_curated_8
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4592..5602)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A7A3_9MICO
Permease {ECO:0000313|EMBL:EXJ51767.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
permease; K07089
scnpilot_p_inoc_scaffold_1132_curated_9
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5592..6014)
DNA (423bp) protein (141aa)
Ferric-uptake regulator n=2 Tax=Microbacterium RepID=H8E6W3_9MICO
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:EXJ51766.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
fur; Fe2+/Zn2+ uptake regulation proteins; K03711 Fur family transcriptional regulator, ferric uptake regulator
scnpilot_p_inoc_scaffold_1132_curated_10
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6071..6931)
DNA (861bp) protein (287aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E6W2_9MICO
ABC transporter permease {ECO:0000313|EMBL:KIC58720.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
znuB; Mn/Zn ABC transporter permease; K02075 zinc/manganese transport system permease protein
scnpilot_p_inoc_scaffold_1132_curated_11
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6928..7767)
DNA (840bp) protein (280aa)
ABC transporter related protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E6W1_9MICO
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KIC58719.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
fhuC; Mn/Zn ABC transporter ATPase; K02074 zinc/manganese transport system ATP-binding protein
scnpilot_p_inoc_scaffold_1132_curated_12
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7764..8702)
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AQM8_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ51763.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
metal ABC transporter periplasmic protein; K02077 zinc/manganese transport system substrate-binding protein
scnpilot_p_inoc_scaffold_1132_curated_13
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8997..9488
DNA (492bp) protein (164aa)
Putative manganese efflux pump MntP n=2 Tax=Microbacterium RepID=H8E6V9_9MICO
Putative manganese efflux pump MntP {ECO:0000256|HAMAP-Rule:MF_01521}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1132_curated_14
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9547..9780
DNA (234bp) protein (78aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E6V8_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ51760.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
scnpilot_p_inoc_scaffold_1132_curated_15
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9812..10438)
DNA (627bp) protein (209aa)
Multiple antibiotic resistance (MarC)-related protein n=2 Tax=Microbacterium RepID=H8E6V7_9MICO
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
Multiple antibiotic transport protein marC
scnpilot_p_inoc_scaffold_1132_curated_16
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10470..11795)
DNA (1326bp) protein (442aa)
pdhC; pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component; K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12]
Pyruvate dehydrogenase E2 component (Dihydrolipoamide acetyltransferase) n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A5T3_9MICO
Branched-chain alpha-keto acid dehydrogenase subunit E2 {ECO:0000313|EMBL:EXJ51758.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
scnpilot_p_inoc_scaffold_1132_curated_17
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11918..12895)
DNA (978bp) protein (326aa)
pdhB; pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit; K00162 pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
Transketolase central region n=2 Tax=Microbacterium RepID=H8E6V5_9MICO
2-oxoisovalerate dehydrogenase subunit beta {ECO:0000313|EMBL:EXJ51757.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
scnpilot_p_inoc_scaffold_1132_curated_18
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12895..14022)
DNA (1128bp) protein (376aa)
pdhA; pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit; K00161 pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
Pyruvate dehydrogenase E1 component subunit alpha n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A793_9MICO
Pyruvate dehydrogenase E1 subunit alpha {ECO:0000313|EMBL:EXJ51756.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
scnpilot_p_inoc_scaffold_1132_curated_19
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14116..15186)
DNA (1071bp) protein (357aa)
Putative phenylalanine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01513}; EC=2.6.1.- {ECO:0000256|HAMAP-Rule:MF_01513};; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hisC2; histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9]
Putative phenylalanine aminotransferase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E6V3_9MICO
scnpilot_p_inoc_scaffold_1132_curated_20
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15266..15667
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3B794_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD84459.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
hypothetical protein; K08972 putative membrane protein
scnpilot_p_inoc_scaffold_1132_curated_21
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15684..17012)
DNA (1329bp) protein (443aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A5T0_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD84458.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1132_curated_22
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17009..17260)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AQM2_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD84457.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
scnpilot_p_inoc_scaffold_1132_curated_23
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17455..17892
DNA (438bp) protein (146aa)
ptpA; protein-tyrosine-phosphatase; K01104 protein-tyrosine phosphatase [EC:3.1.3.48]
Protein-tyrosine phosphatase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A790_9MICO
Protein-tyrosine phosphatase {ECO:0000313|EMBL:EPD84456.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
scnpilot_p_inoc_scaffold_1132_curated_24
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17903..19339
DNA (1437bp) protein (479aa)
purB; adenylosuccinate lyase; K01756 adenylosuccinate lyase [EC:4.3.2.2]
Adenylosuccinate lyase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ACQ9_9MICO
Adenylosuccinate lyase {ECO:0000313|EMBL:EPD84455.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
scnpilot_p_inoc_scaffold_1132_curated_25
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19369..19704)
DNA (336bp) protein (112aa)
Amino acid transporter n=2 Tax=Microbacterium RepID=H8E6U7_9MICO
Amino acid transporter {ECO:0000313|EMBL:EIC07383.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
amino acid transporters
scnpilot_p_inoc_scaffold_1132_curated_26
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19701..20393)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A5S6_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD84453.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
scnpilot_p_inoc_scaffold_1132_curated_27
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20503..20940)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AQL6_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ51318.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1132_curated_28
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20953..21363)
DNA (411bp) protein (137aa)
Putative uncharacterized protein n=1 Tax=Corynebacterium variabile (strain DSM 44702 / JCM 12073 / NCIMB 30131) RepID=G0H9R0_CORVD
Glyoxalase {ECO:0000313|EMBL:KIC58706.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1132_curated_29
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21369..21806)
DNA (438bp) protein (146aa)
AraC family transcriptional regulator n=1 Tax=Dyella japonica RepID=UPI00031123A1
AraC family transcriptional regulator {ECO:0000313|EMBL:KIC58705.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
AraC family transcriptional regulator
scnpilot_p_inoc_scaffold_1132_curated_30
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21803..22792)
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A784_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD84451.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
oxidoreductase
Displaying items 1-30 of 34 in total

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