ggKbase home page

scnpilot_p_inoc_scaffold_98_curated

Search features with annotation key words

Displaying items 1-30 of 273 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_98_curated_1
unknown

Not on your lists

comp(1..93)
DNA (93bp) protein (31aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_98_curated_2
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(141..332)
DNA (192bp) protein (64aa)
excisionase n=1 Tax=Microbacterium yannicii RepID=UPI0002E488FB
Excisionase family DNA binding domain-containing protein {ECO:0000313|EMBL:EZP28140.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
excisionase
scnpilot_p_inoc_scaffold_98_curated_3
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(458..865)
DNA (408bp) protein (136aa)
Regulatory protein ArsR n=2 Tax=Microbacterium RepID=H8E3V4_9MICO
Transcriptional regulator {ECO:0000313|EMBL:EXJ51938.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
transcriptional regulator
scnpilot_p_inoc_scaffold_98_curated_4
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

936..2378
DNA (1443bp) protein (481aa)
Cation transporter n=2 Tax=Microbacterium RepID=H8E3V3_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD84835.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
trkH; trk-type K+ transport systems, membrane components
scnpilot_p_inoc_scaffold_98_curated_5
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2371..3042
DNA (672bp) protein (224aa)
TrkA-N domain protein n=2 Tax=Microbacterium RepID=H8E3V2_9MICO
Potassium transporter {ECO:0000313|EMBL:EXJ51940.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
trkA; K+ transport systems, NAD-binding component; K03499 trk system potassium uptake protein TrkA
scnpilot_p_inoc_scaffold_98_curated_6
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3066..3899)
DNA (834bp) protein (278aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925, ECO:0000256|RuleBase:RU003903}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925, ECO:0000256|RuleBase:RU003903};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
proC; pyrroline-5-carboxylate reductase; K00286 pyrroline-5-carboxylate reductase [EC:1.5.1.2]
Pyrroline-5-carboxylate reductase n=2 Tax=Microbacterium RepID=H8E3V0_9MICO
scnpilot_p_inoc_scaffold_98_curated_7
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3973..5085
DNA (1113bp) protein (371aa)
Predicted hydrolase or acyltransferase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NG13_MICTS
hydrolase or acyltransferase
Predicted hydrolase or acyltransferase {ECO:0000313|EMBL:BAJ75276.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_98_curated_8
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5111..5614)
DNA (504bp) protein (168aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
CMP/dCMP deaminase zinc-binding protein n=2 Tax=Microbacterium RepID=H8E3U8_9MICO
cytosine/adenosine deaminase
scnpilot_p_inoc_scaffold_98_curated_9
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5760..6392
DNA (633bp) protein (211aa)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000256|HAMAP-Rule:MF_01218}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
upp; uracil phosphoribosyltransferase; K00761 uracil phosphoribosyltransferase [EC:2.4.2.9]
Uracil phosphoribosyltransferase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E3U7_9MICO
scnpilot_p_inoc_scaffold_98_curated_10
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6419..6718)
DNA (300bp) protein (100aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E3U5_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KIC56564.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hypothetical protein
scnpilot_p_inoc_scaffold_98_curated_11
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6763..10281)
DNA (3519bp) protein (1173aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A8G5_9MICO
DNA helicase {ECO:0000313|EMBL:EXJ51948.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
superfamily I DNA and RNA helicase and helicase subunits; K06860 uncharacterized protein
scnpilot_p_inoc_scaffold_98_curated_12
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10365..12464
DNA (2100bp) protein (700aa)
NAD synthetase {ECO:0000313|EMBL:KIC56562.1}; EC=6.3.5.1 {ECO:0000313|EMBL:KIC56562.1};; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
nadE; NAD synthase; K01950 NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
NAD+ synthetase n=1 Tax=Microbacterium sp. 11MF RepID=UPI00036C8170
scnpilot_p_inoc_scaffold_98_curated_13
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12492..13079)
DNA (588bp) protein (196aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E3U2_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KIC56561.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
scnpilot_p_inoc_scaffold_98_curated_14
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

13186..14664
DNA (1479bp) protein (493aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00035F50D0
dehydrogenase
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_p_inoc_scaffold_98_curated_15
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14669..15223
DNA (555bp) protein (185aa)
nucleoside phosphorylase; K01243 S-adenosylhomocysteine/5'-methylthioadenosine nucleosidase [EC:3.2.2.9]
hypothetical protein n=1 Tax=Microbacterium RepID=UPI000364BCF3
Nucleoside phosphorylase {ECO:0000313|EMBL:EZP28152.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
scnpilot_p_inoc_scaffold_98_curated_16
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15242..16168
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A6T1_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ51964.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
mixed-linked glucanase
scnpilot_p_inoc_scaffold_98_curated_17
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16211..17233
DNA (1023bp) protein (341aa)
Predicted membrane protein n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N7J7_MICTS
hypothetical protein
Predicted membrane protein {ECO:0000313|EMBL:BAJ73030.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_98_curated_18
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17267..20266)
DNA (3000bp) protein (1000aa)
Exonuclease n=1 Tax=Microbacterium sp. TS-1 RepID=U2YSX1_9MICO
Exonuclease {ECO:0000313|EMBL:GAD33793.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
ATPase; K03546 exonuclease SbcC
scnpilot_p_inoc_scaffold_98_curated_19
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20263..21483)
DNA (1221bp) protein (407aa)
DNA repair exonuclease n=1 Tax=Microbacterium sp. TS-1 RepID=U2YLC1_9MICO
DNA repair exonuclease {ECO:0000313|EMBL:GAD33794.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
DNA repair exonuclease; K03547 exonuclease SbcD
scnpilot_p_inoc_scaffold_98_curated_20
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21535..22998)
DNA (1464bp) protein (488aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ADR8_9MICO
MFS transporter {ECO:0000313|EMBL:EXJ51952.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
permease of the major facilitator superfamily
scnpilot_p_inoc_scaffold_98_curated_21
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23009..23317)
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002F1C7B4
Uncharacterized protein {ECO:0000313|EMBL:KJL29337.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein
scnpilot_p_inoc_scaffold_98_curated_22
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23357..23656)
DNA (300bp) protein (100aa)
Acetyltransferase n=1 Tax=Microbacterium sp. TS-1 RepID=U2YSX7_9MICO
Acetyltransferase {ECO:0000313|EMBL:GAD33798.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
acetyltransferase; K06975
scnpilot_p_inoc_scaffold_98_curated_23
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24080..24829
DNA (750bp) protein (250aa)
Transcriptional regulator domain-containing protein n=2 Tax=Microbacterium RepID=H8E3S3_9MICO
Transcriptional regulator {ECO:0000313|EMBL:EXJ51955.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
scnpilot_p_inoc_scaffold_98_curated_24
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24879..25874
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A6R5_9MICO
3-methyladenine DNA glycosylase {ECO:0000313|EMBL:EXJ51956.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
scnpilot_p_inoc_scaffold_98_curated_25
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25947..26360
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000382A765
3-demethylubiquinone-9 3-methyltransferase {ECO:0000313|EMBL:KHK95686.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
hypothetical protein; K04750 PhnB protein
scnpilot_p_inoc_scaffold_98_curated_26
Janibacter hoylei, Janibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26385..27140)
DNA (756bp) protein (252aa)
Iron-siderophore ABC transporter ATP-binding subunit n=1 Tax=Janibacter hoylei PVAS-1 RepID=K1E3I4_9MICO
Iron-siderophore ABC transporter ATP-binding subunit {ECO:0000313|EMBL:EKA61576.1}; TaxID=1210046 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Janibacter.;" source="Janibacter hoylei PVAS-1.;"
ABC transporter family protein
scnpilot_p_inoc_scaffold_98_curated_27
Nocardiopsis alba, Nocardiopsis, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27137..28159)
DNA (1023bp) protein (341aa)
enterochelin ABC transporter permease n=1 Tax=Nocardiopsis alkaliphila RepID=UPI000346A814
fecCD transport family protein
FecCD transport family protein {ECO:0000313|EMBL:AFR07115.1}; TaxID=1205910 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocardiopsis alba (strain ATCC BAA-2165 / BE74).;"
scnpilot_p_inoc_scaffold_98_curated_28
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28152..29111)
DNA (960bp) protein (320aa)
iron ABC transporter permease n=1 Tax=Nocardiopsis ganjiahuensis RepID=UPI0003472922
Iron ABC transporter permease {ECO:0000313|EMBL:KDA04983.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
ABC transporter transmembrane protein; K02015 iron complex transport system permease protein
scnpilot_p_inoc_scaffold_98_curated_29
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29141..30124)
DNA (984bp) protein (328aa)
iron ABC transporter substrate-binding protein n=1 Tax=Nocardiopsis ganjiahuensis RepID=UPI00034D1C4C
Iron ABC transporter substrate-binding protein {ECO:0000313|EMBL:KDA04984.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
periplasmic binding family protein
scnpilot_p_inoc_scaffold_98_curated_30
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30172..30987
DNA (816bp) protein (272aa)
Siderophore-interacting protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2XLI3_9MICO
Siderophore-interacting protein {ECO:0000313|EMBL:GAD33807.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
siderophore-interacting protein
Displaying items 1-30 of 273 in total

View Taxonomy