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scnpilot_p_inoc_scaffold_1640_curated

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1640_curated_1
Agrococcus pavilionensis, Agrococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(163..1344)
DNA (1182bp) protein (394aa)
hypothetical protein; K01953 asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
Uncharacterized protein n=1 Tax=Agrococcus pavilionensis RW1 RepID=U1MV64_9MICO
Uncharacterized protein {ECO:0000313|EMBL:ERG64550.1}; TaxID=1330458 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agrococcus.;" source="Agrococcus pavilionensis RW1.;"
scnpilot_p_inoc_scaffold_1640_curated_2
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1930..2187)
DNA (258bp) protein (86aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI000374AFDD
Acyl carrier protein {ECO:0000256|RuleBase:RU003545}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1640_curated_3
Cryobacterium sp. MLB-32, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2212..3435)
DNA (1224bp) protein (408aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI0003811167
Diaminopimelate decarboxylase {ECO:0000313|EMBL:KFF58957.1}; TaxID=1529318 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium sp. MLB-32.;"
pyridoxal-dependent decarboxylase exosortase system type 1 protein
scnpilot_p_inoc_scaffold_1640_curated_4
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3432..5000)
DNA (1569bp) protein (523aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00037FB5D6
Acyl--CoA ligase {ECO:0000313|EMBL:KDA04889.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
acetyl-coenzyme A synthetase
scnpilot_p_inoc_scaffold_1640_curated_5
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4975..6234)
DNA (1260bp) protein (420aa)
Glycosyl transferase group 1 n=1 Tax=Propionibacterium acidipropionici (strain ATCC 4875 / DSM 20272 / JCM 6432 / NBRC 12425 / NCIMB 8070) RepID=K7RTP0_PROA4
Uncharacterized protein {ECO:0000313|EMBL:KDA04891.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
Glycosyl transferase group 1
scnpilot_p_inoc_scaffold_1640_curated_6
Arthrobacter aurescens, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6310..7908)
DNA (1599bp) protein (533aa)
Putative N-acetylglucosaminyl phosphatidylinositol deacetylase n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4ER60_MODMB
N-acetylglucosaminyl phosphatidylinositol deacetylase
FG-GAP repeat domain protein {ECO:0000313|EMBL:ABM08920.1}; TaxID=290340 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter aurescens (strain TC1).;"
scnpilot_p_inoc_scaffold_1640_curated_7
Propionibacterium acidipropionici, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(7991..9397)
DNA (1407bp) protein (469aa)
Glycosyl transferase group 1 n=1 Tax=Propionibacterium acidipropionici (strain ATCC 4875 / DSM 20272 / JCM 6432 / NBRC 12425 / NCIMB 8070) RepID=K7SKE4_PROA4
Glycosyl transferase group 1
Glycosyl transferase group 1 {ECO:0000313|EMBL:AFV89750.1}; TaxID=1171373 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium acidipropionici (strain ATCC 4875 / DSM 20272 / JCM; 6432 / NBRC 12425 / NCIMB 8070).;"
scnpilot_p_inoc_scaffold_1640_curated_8
Propionibacterium acidipropionici, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9400..10815)
DNA (1416bp) protein (472aa)
Putative glycosyl transferase / polysaccharide biosynthesis domain-containing protein n=1 Tax=Propionibacterium acidipropionici (strain ATCC 4875 / DSM 20272 / JCM 6432 / NBRC 12425 / NCIMB 8070) RepID=K7SKG2_PROA4
Putative glycosyl transferase / polysaccharide biosynthesis domain-containing protein
Putative glycosyl transferase / polysaccharide biosynthesis domain-containing protein {ECO:0000313|EMBL:AFV89760.1}; TaxID=1171373 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium acidipropionici (strain ATCC 4875 / DSM 20272 / JCM; 6432 / NBRC 12425 / NCIMB 8070).;"
scnpilot_p_inoc_scaffold_1640_curated_9
Propionibacterium acidipropionici, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10815..11414)
DNA (600bp) protein (200aa)
Hexapeptide transferase family protein (EC:2.3.1.30)
Serine acetyltransferase {ECO:0000256|PIRNR:PIRNR000441}; EC=2.3.1.30 {ECO:0000256|PIRNR:PIRNR000441};; TaxID=1171373 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium acidipropionici (strain ATCC 4875 / DSM 20272 / JCM; 6432 / NBRC 12425 / NCIMB 8070).;"
Serine acetyltransferase n=1 Tax=Propionibacterium acidipropionici (strain ATCC 4875 / DSM 20272 / JCM 6432 / NBRC 12425 / NCIMB 8070) RepID=K7RXN9_PROA4
scnpilot_p_inoc_scaffold_1640_curated_10
Nocardioides luteus, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11513..11776)
DNA (264bp) protein (88aa)
Acyl carrier protein n=1 Tax=Propionibacterium acidipropionici (strain ATCC 4875 / DSM 20272 / JCM 6432 / NBRC 12425 / NCIMB 8070) RepID=K7RP17_PROA4
Acyl carrier protein {ECO:0000313|EMBL:KJR12038.1}; TaxID=1844 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides luteus.;"
Acyl carrier protein
scnpilot_p_inoc_scaffold_1640_curated_11
Nocardioides luteus, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11928..13859
DNA (1932bp) protein (644aa)
asparagine synthase; K01953 asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
Asparagine synthetase n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9V2F0_9ACTO
Asparagine synthase {ECO:0000313|EMBL:KJR12037.1}; TaxID=1844 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides luteus.;"
scnpilot_p_inoc_scaffold_1640_curated_12
Propionibacterium acidipropionici, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13856..14848
DNA (993bp) protein (331aa)
NH(3)-dependent NAD(+) synthetase (EC:6.3.1.5)
NH(3)-dependent NAD(+) synthetase {ECO:0000256|HAMAP-Rule:MF_00193, ECO:0000256|RuleBase:RU003812}; EC=6.3.1.5 {ECO:0000256|HAMAP-Rule:MF_00193, ECO:0000256|RuleBase:RU003812};; TaxID=1171373 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium acidipropionici (strain ATCC 4875 / DSM 20272 / JCM; 6432 / NBRC 12425 / NCIMB 8070).;"
NH(3)-dependent NAD(+) synthetase n=1 Tax=Propionibacterium acidipropionici (strain ATCC 4875 / DSM 20272 / JCM 6432 / NBRC 12425 / NCIMB 8070) RepID=K7RTM4_PROA4
scnpilot_p_inoc_scaffold_1640_curated_13
Nocardioidaceae bacterium Broad-1, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14832..15203)
DNA (372bp) protein (124aa)
Holo-[acyl-carrier-protein] synthase {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00237208}; Short=Holo-ACP synthase {ECO:0000256|HAMAP-Rule:MF_00101};; EC=2.7.8.7 {ECO:0000256|HAMAP-Rule:MF_00101};; 4'-phosphopantetheinyl transferase AcpS {ECO:0000256|HAMAP-Rule:MF_00101}; TaxID=408672 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;"
acpS; holo-[acyl-carrier-protein] synthase (EC:2.7.8.7); K00997 holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
Holo-[acyl-carrier-protein] synthase n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9V2E2_9ACTO
scnpilot_p_inoc_scaffold_1640_curated_14
Propionibacterium acidipropionici, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15200..16024)
DNA (825bp) protein (275aa)
PE-PGRS family protein n=1 Tax=Propionibacterium acidipropionici (strain ATCC 4875 / DSM 20272 / JCM 6432 / NBRC 12425 / NCIMB 8070) RepID=K7S550_PROA4
PE-PGRS family protein
PE-PGRS family protein {ECO:0000313|EMBL:AFV89747.1}; TaxID=1171373 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium acidipropionici (strain ATCC 4875 / DSM 20272 / JCM; 6432 / NBRC 12425 / NCIMB 8070).;"
scnpilot_p_inoc_scaffold_1640_curated_15
Nocardioidaceae bacterium Broad-1, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16046..17377)
DNA (1332bp) protein (444aa)
Putative long-chain-fatty-acid--CoA ligase n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9V2E0_9ACTO
Putative long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:EGD40517.1}; TaxID=408672 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;"
Putative long-chain-fatty-acid--CoA ligase
scnpilot_p_inoc_scaffold_1640_curated_16
Agrococcus pavilionensis, Agrococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17812..18441
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002E262ED
Uncharacterized protein {ECO:0000313|EMBL:ERG64714.1}; TaxID=1330458 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agrococcus.;" source="Agrococcus pavilionensis RW1.;"
Acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase
scnpilot_p_inoc_scaffold_1640_curated_17
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18438..18674
DNA (237bp) protein (79aa)
L-2-hydroxyglutarate oxidase {ECO:0000313|EMBL:AIY16895.1}; EC=1.1.3.15 {ECO:0000313|EMBL:AIY16895.1};; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
hypothetical protein n=1 Tax=Pseudoclavibacter faecalis RepID=UPI00036C2B0C
hydroxyglutarate oxidase
scnpilot_p_inoc_scaffold_1640_curated_18
Bifidobacterium gallicum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18872..20236)
DNA (1365bp) protein (455aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI0003620539
Uncharacterized protein {ECO:0000313|EMBL:KFI59683.1}; TaxID=561180 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallicum DSM 20093 = LMG 11596.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1640_curated_19
unknown

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comp(20226..21542)
DNA (1317bp) protein (439aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1640_curated_20
unknown

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comp(21547..22305)
DNA (759bp) protein (253aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1640_curated_21
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22628..23575)
DNA (948bp) protein (316aa)
Pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_00215, ECO:0000256|RuleBase:RU003530}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_00215, ECO:0000256|RuleBase:RU003530};; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_00215}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
coaA; panthothenate kinase; K00867 type I pantothenate kinase [EC:2.7.1.33]
Pantothenate kinase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AWF5_9MICO
scnpilot_p_inoc_scaffold_1640_curated_22
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23842..24783
DNA (942bp) protein (314aa)
exopolyphosphatase; K01524 exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037A7D67
Exopolyphosphatase {ECO:0000313|EMBL:KHK99326.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
Displaying 22 items

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