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scnpilot_p_inoc_scaffold_111_curated

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Displaying items 1-30 of 307 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_111_curated_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

1..1236
DNA (1236bp) protein (412aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002FD541D
DNA repair ATPase {ECO:0000313|EMBL:AHG87747.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
DNA repair ATPase
scnpilot_p_inoc_scaffold_111_curated_2
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1470..1679)
DNA (210bp) protein (70aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI00034A7EA9
Uncharacterized protein {ECO:0000313|EMBL:KEP72900.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
hypothetical protein
scnpilot_p_inoc_scaffold_111_curated_3
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

comp(2023..2280)
DNA (258bp) protein (86aa)
hypothetical protein n=1 Tax=Nonomuraea coxensis RepID=UPI000377C2D1
Uncharacterized protein {ECO:0000313|EMBL:KIY12811.1}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
hypothetical protein
scnpilot_p_inoc_scaffold_111_curated_4
Mumia flava, Mumia, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2371..3270
DNA (900bp) protein (300aa)
Putative uncharacterized protein n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RF70_9ACTO
LysR family transcriptional regulator {ECO:0000313|EMBL:KHL16530.1}; TaxID=1348852 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Mumia.;" source="Mumia flava.;"
LysR family transcriptional regulator
scnpilot_p_inoc_scaffold_111_curated_5
Mycobacterium marinum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3421..3978
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Mycobacterium marinum (strain ATCC BAA-535 / M) RepID=B2HL32_MYCMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACC42008.1}; TaxID=216594 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium marinum (strain ATCC BAA-535 / M).;"
scnpilot_p_inoc_scaffold_111_curated_6
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3975..4817
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XE29_MICPN
Uncharacterized protein {ECO:0000313|EMBL:CCH77523.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
hypothetical protein
scnpilot_p_inoc_scaffold_111_curated_7
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4872..5372)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8ND47_MICTS
Small multidrug efflux protein {ECO:0000313|EMBL:KEP76311.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
hypothetical protein
scnpilot_p_inoc_scaffold_111_curated_8
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5517..6179)
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PWH9_KRIFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB33448.1}; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
scnpilot_p_inoc_scaffold_111_curated_9
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6176..6823)
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Curtobacterium sp. B8 RepID=UPI00034B237B
Uncharacterized protein {ECO:0000313|EMBL:KJQ52693.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
hypothetical protein
scnpilot_p_inoc_scaffold_111_curated_10
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6882..8114
DNA (1233bp) protein (411aa)
signal transduction histidine kinase; K07778 two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
Signal transduction histidine kinase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8ND46_MICTS
Signal transduction histidine kinase {ECO:0000313|EMBL:BAJ73685.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_111_curated_11
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8111..8713
DNA (603bp) protein (201aa)
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8ND45_MICTS
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; K07693 two-component system, NarL family, response regulator DesR
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain {ECO:0000313|EMBL:BAJ73684.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_111_curated_12
Nocardiopsis dassonvillei, Nocardiopsis, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8784..9461
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI000348D2E2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADH67215.1}; TaxID=446468 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocardiopsis dassonvillei (strain ATCC 23218 / DSM 43111 / IMRU 509 /; JCM 7437 / NCTC 10488) (Actinomadura dassonvillei).;"
scnpilot_p_inoc_scaffold_111_curated_13
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9478..10371
DNA (894bp) protein (298aa)
Alpha/beta hydrolase fold containing protein n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0K7I1_SACES
alpha/beta hydrolase fold containing protein
Alpha/beta hydrolase fold containing protein {ECO:0000313|EMBL:CCH32849.1}; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
scnpilot_p_inoc_scaffold_111_curated_14
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10833..11108
DNA (276bp) protein (92aa)
Uncharacterized protein {ECO:0000313|EMBL:KEP76309.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
scnpilot_p_inoc_scaffold_111_curated_15
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11304..11636
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI0003491EBE
Uncharacterized protein {ECO:0000313|EMBL:KEP76316.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
scnpilot_p_inoc_scaffold_111_curated_16
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11659..12264)
DNA (606bp) protein (202aa)
Transcriptional regulator n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NDN1_MICTS
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:BAJ73707.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_111_curated_17
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12231..12845)
DNA (615bp) protein (205aa)
Predicted flavoprotein n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NDN0_MICTS
flavoprotein
Predicted flavoprotein {ECO:0000313|EMBL:BAJ73706.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_111_curated_18
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12961..13446
DNA (486bp) protein (162aa)
Cytosine/adenosine deaminase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8ND50_MICTS
cytosine/adenosine deaminase
Cytosine/adenosine deaminase {ECO:0000313|EMBL:BAJ73689.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_111_curated_19
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13443..13760
DNA (318bp) protein (106aa)
Biotin carboxyl carrier protein n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8ND55_MICTS
biotin carboxyl carrier protein
Biotin carboxyl carrier protein {ECO:0000313|EMBL:BAJ73694.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_111_curated_20
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13785..15026)
DNA (1242bp) protein (414aa)
Putative oxidoreductase n=1 Tax=Gordonia namibiensis NBRC 108229 RepID=K6WNK2_9ACTO
Contig_7, whole genome shotgun sequence {ECO:0000313|EMBL:KIP94138.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
scnpilot_p_inoc_scaffold_111_curated_21
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15273..16436
DNA (1164bp) protein (388aa)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
sucC; succinyl-CoA synthetase, beta subunit; K01903 succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
succinyl-CoA synthetase subunit beta n=1 Tax=Microbacterium sp. B19 RepID=UPI000349BADD
scnpilot_p_inoc_scaffold_111_curated_22
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16454..17356
DNA (903bp) protein (301aa)
sucD; succinyl-CoA synthetase, alpha subunit; K01902 succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
succinyl-CoA synthetase subunit alpha n=1 Tax=Microbacterium sp. B19 RepID=UPI00034B419C
scnpilot_p_inoc_scaffold_111_curated_23
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17694..19145)
DNA (1452bp) protein (484aa)
MFS transporter n=1 Tax=Microbacterium sp. B19 RepID=UPI00034AAB6F
permease; K06901 putative MFS transporter, AGZA family, xanthine/uracil permease
Permease {ECO:0000313|EMBL:BAJ73679.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_111_curated_24
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19202..19648
DNA (447bp) protein (149aa)
nitroreductase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034919DD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ73678.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_111_curated_25
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19784..21280
DNA (1497bp) protein (499aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI00034DB4BC
Uncharacterized protein {ECO:0000313|EMBL:KEP75202.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
hypothetical protein
scnpilot_p_inoc_scaffold_111_curated_26
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21285..21878
DNA (594bp) protein (198aa)
purN; folate-dependent phosphoribosylglycinamide formyltransferase PurN; K11175 phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI00034BA16C
scnpilot_p_inoc_scaffold_111_curated_27
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21934..23544
DNA (1611bp) protein (537aa)
purH; AICAR transformylase/IMP cyclohydrolase PurH; K00602 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
IMP cyclohydrolase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003479B88
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_111_curated_28
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23781..24296)
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI00034CD368
purH; hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:BAJ73666.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_111_curated_29
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24361..25788)
DNA (1428bp) protein (476aa)
pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component; K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4]
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034B2D7E
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component {ECO:0000313|EMBL:BAJ73665.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_111_curated_30
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26003..27028
DNA (1026bp) protein (342aa)
LacI family transcription regulator n=1 Tax=Microbacterium sp. B19 RepID=UPI00034BD6A7
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:BAJ73664.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
Displaying items 1-30 of 307 in total

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