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scnpilot_p_inoc_scaffold_1475_curated

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1475_curated_1
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(2..598)
DNA (597bp) protein (199aa)
50S ribosomal protein L3 n=1 Tax=Microbacterium sp. B19 RepID=UPI000345FA97
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
rplC; ribosomal protein L3; K02906 large subunit ribosomal protein L3
scnpilot_p_inoc_scaffold_1475_curated_2
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(607..915)
DNA (309bp) protein (103aa)
30S ribosomal protein S10 n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NF35_MICTS
rpsJ; ribosomal protein S10; K02946 small subunit ribosomal protein S10
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_1475_curated_3
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1354..1569)
DNA (216bp) protein (72aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI00034577B5
Uncharacterized protein {ECO:0000313|EMBL:GAD34946.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1475_curated_4
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1677..2600)
DNA (924bp) protein (308aa)
Putative nucleoside-diphosphate sugar epimerases n=1 Tax=Microbacterium sp. TS-1 RepID=U2YWW8_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KEP75183.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
nucleoside-diphosphate-sugar epimerase
scnpilot_p_inoc_scaffold_1475_curated_5
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2597..3598)
DNA (1002bp) protein (334aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
GDP-D-mannose dehydratase; K01711 GDPmannose 4,6-dehydratase [EC:4.2.1.47]
GDP-mannose 4,6-dehydratase n=1 Tax=Microbacterium sp. TS-1 PF8_9MICO">RepID=U2YPF8_9MICO
scnpilot_p_inoc_scaffold_1475_curated_6
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3816..4592)
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B647AE
HTH-type transcriptional activator RhaS {ECO:0000313|EMBL:KJL27809.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
AraC family transcriptional regulator
scnpilot_p_inoc_scaffold_1475_curated_7
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4880..5884)
DNA (1005bp) protein (335aa)
Uncharacterized protein {ECO:0000313|EMBL:KEP75267.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
scnpilot_p_inoc_scaffold_1475_curated_8
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6177..7616
DNA (1440bp) protein (480aa)
chromosome partitioning protein n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B42160
ATPase
ATPase {ECO:0000313|EMBL:BAJ73893.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_1475_curated_9
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7613..8209
DNA (597bp) protein (199aa)
protein-tyrosine-phosphatase; K01104 protein-tyrosine phosphatase [EC:3.1.3.48]
Protein-tyrosine-phosphatase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NF40_MICTS
Uncharacterized protein {ECO:0000313|EMBL:KEP75265.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
scnpilot_p_inoc_scaffold_1475_curated_10
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8176..8268)
DNA (93bp) protein (31aa)
Uncharacterized protein {ECO:0000313|EMBL:KJL27810.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
scnpilot_p_inoc_scaffold_1475_curated_11
unknown

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comp(8279..8869)
DNA (591bp) protein (197aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1475_curated_12
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9063..10595)
DNA (1533bp) protein (511aa)
Putative ATP-binding protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2XQ67_9MICO
Putative ATP-binding protein {ECO:0000313|EMBL:GAD35017.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
ATPase
scnpilot_p_inoc_scaffold_1475_curated_13
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10766..12454
DNA (1689bp) protein (563aa)
Fibronectin type 3 domain-containing protein n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NGN2_MICTS
fibronectin type 3 domain-containing protein
Fibronectin type 3 domain-containing protein {ECO:0000313|EMBL:BAJ75331.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_1475_curated_14
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12517..13482)
DNA (966bp) protein (322aa)
Glycoside hydrolase family 5 n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UJC4_CELFN
glycoside hydrolase family protein
Glycoside hydrolase family 5 {ECO:0000313|EMBL:ADG73647.1}; Flags: Precursor;; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
scnpilot_p_inoc_scaffold_1475_curated_15
Bacillus megaterium, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13656..14249)
DNA (594bp) protein (198aa)
serine acetyltransferase (EC:2.3.1.30); K00640 serine O-acetyltransferase [EC:2.3.1.30]
Serine acetyltransferase {ECO:0000256|PIRNR:PIRNR000441}; EC=2.3.1.30 {ECO:0000256|PIRNR:PIRNR000441};; TaxID=592022 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus megaterium (strain DSM 319).;"
serine O-acetyltransferase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034C65A2
scnpilot_p_inoc_scaffold_1475_curated_16
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14246..14758)
DNA (513bp) protein (171aa)
Similar to Protein capG, involved in capsular polysaccharide (CPS) biosynthesis n=1 Tax=Microbacterium sp. B19 RepID=UPI0003463547
Uncharacterized protein {ECO:0000313|EMBL:CDK00459.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1475_curated_17
Mycobacterium sp. KMS, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15080..17125
DNA (2046bp) protein (682aa)
Acyltransferase 3 n=2 Tax=Mycobacterium RepID=A1UBG1_MYCSK
acyltransferase 3
Acyltransferase 3 {ECO:0000313|EMBL:ABL90169.1}; TaxID=189918 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium sp. (strain KMS).;"
scnpilot_p_inoc_scaffold_1475_curated_18
Mycobacterium cosmeticum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17348..18301
DNA (954bp) protein (318aa)
putative nucleotide-sugar epimerase (EC:5.1.3.-)
nucleotide sugar epimerase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034D1D25
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:CDO06996.1}; TaxID=258533 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium cosmeticum.;"
scnpilot_p_inoc_scaffold_1475_curated_19
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18318..19388
DNA (1071bp) protein (357aa)
putative glycosyltransferase (EC:2.4.-.-)
Putative glycosyltransferase {ECO:0000313|EMBL:BAH56176.1}; EC=2.4.-.- {ECO:0000313|EMBL:BAH56176.1};; TaxID=632772 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (strain B4).;"
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI000344A182
scnpilot_p_inoc_scaffold_1475_curated_20
Streptomyces niveus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19385..20995
DNA (1611bp) protein (537aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI0003783004
Uncharacterized protein {ECO:0000313|EMBL:EST24928.1}; TaxID=1352941 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces niveus NCIMB 11891.;"
integral membrane protein MviN
scnpilot_p_inoc_scaffold_1475_curated_21
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21011..22114
DNA (1104bp) protein (368aa)
putative glycosyltransferase (EC:2.4.-.-)
Putative glycosyltransferase {ECO:0000313|EMBL:BAH56177.1}; EC=2.4.-.- {ECO:0000313|EMBL:BAH56177.1};; TaxID=632772 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (strain B4).;"
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI00034B3DB7
scnpilot_p_inoc_scaffold_1475_curated_22
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22123..23178
DNA (1056bp) protein (352aa)
Putative uncharacterized protein n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2SGQ6_HAHCH
Uncharacterized protein {ECO:0000313|EMBL:KGH46738.1}; TaxID=1522368 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1475_curated_23
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23175..24128
DNA (954bp) protein (318aa)
Glycosyltransferase 28 domain protein n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UJC0_CELFN
glycosyl transferase family protein
Glycosyltransferase 28 domain protein {ECO:0000313|EMBL:ADG73643.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
scnpilot_p_inoc_scaffold_1475_curated_24
unknown

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comp(24174..25469)
DNA (1296bp) protein (432aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1475_curated_25
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25638..26744
DNA (1107bp) protein (369aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI00034A50DE
Uncharacterized protein {ECO:0000313|EMBL:KJL31168.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
sugar ABC transporter ATPase
scnpilot_p_inoc_scaffold_1475_curated_26
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26734..27453
DNA (720bp) protein (240aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
lepB3; signal peptidase I (EC:3.4.21.89)
signal peptidase n=1 Tax=Microbacterium sp. B19 RepID=UPI000349C6C8
scnpilot_p_inoc_scaffold_1475_curated_27
unknown

Not on your lists

27450..27761
DNA (312bp) protein (104aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1475_curated_28
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27739..28689
DNA (951bp) protein (317aa)
SAM-dependent methyltransferase n=1 Tax=Microbacterium sp. TS-1 RepID=U2YWT6_9MICO
SAM-dependent methyltransferase {ECO:0000313|EMBL:GAD35018.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1475_curated_29
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28695..30611)
DNA (1917bp) protein (639aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI000348047C
hypothetical protein
Uncharacterized conserved protein containing a ferredoxin-like domain {ECO:0000313|EMBL:BAJ73891.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_1475_curated_30
unknown

Not on your lists

comp(30685..30969)
DNA (285bp) protein (95aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI0003451259
Displaying items 1-30 of 31 in total

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