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scnpilot_p_inoc_scaffold_120_curated

Search features with annotation key words

Displaying items 121-150 of 471 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_120_curated_121
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(121008..121523)
DNA (516bp) protein (172aa)
MarR family transcriptional regulator n=1 Tax=Microbacterium sp. B19 RepID=UPI00034A2D2D
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:BAJ74727.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_120_curated_122
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

121634..122431
DNA (798bp) protein (266aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI00034B58FB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ74726.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_120_curated_123
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(122670..123275)
DNA (606bp) protein (202aa)
dcd; deoxycytidine deaminase; K01494 dCTP deaminase [EC:3.5.4.13]
Deoxycytidine triphosphate deaminase {ECO:0000256|HAMAP-Rule:MF_00146}; Short=dCTP deaminase {ECO:0000256|HAMAP-Rule:MF_00146};; EC=3.5.4.13 {ECO:0000256|HAMAP-Rule:MF_00146};; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
Deoxycytidine triphosphate deaminase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NB78_MICTS
scnpilot_p_inoc_scaffold_120_curated_124
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

123551..124231
DNA (681bp) protein (227aa)
G-D-S-L family lipolytic protein n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B5FE23
G-D-S-L family lipolytic protein {ECO:0000313|EMBL:KEP75244.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
lysophospholipase L1-like esterase
scnpilot_p_inoc_scaffold_120_curated_125
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(124243..124683)
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B523DE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ74718.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_120_curated_126
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(124683..124964)
DNA (282bp) protein (94aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI00034AC48E
non-ribosomal peptide synthetase modules
Non-ribosomal peptide synthetase modules {ECO:0000313|EMBL:BAJ74717.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_120_curated_127
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(125048..125446)
DNA (399bp) protein (133aa)
ester cyclase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034C67C6
Ester cyclase {ECO:0000313|EMBL:KEP75241.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
ester cyclase
scnpilot_p_inoc_scaffold_120_curated_128
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(125511..125891)
DNA (381bp) protein (127aa)
Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NAL5_MICTS
Gamma-carboxymuconolactone decarboxylase {ECO:0000313|EMBL:KEP75068.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
gamma-carboxymuconolactone decarboxylase
scnpilot_p_inoc_scaffold_120_curated_129
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(125891..126673)
DNA (783bp) protein (261aa)
hydrolase or acyltransferase; K01055 3-oxoadipate enol-lactonase [EC:3.1.1.24]
Predicted hydrolase or acyltransferase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NAL4_MICTS
Alpha/beta hydrolase {ECO:0000313|EMBL:KEP75069.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
scnpilot_p_inoc_scaffold_120_curated_130
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(126670..128073)
DNA (1404bp) protein (468aa)
adenylosuccinate lyase; K01857 3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2]
3-carboxy-cis,cis-muconate cycloisomerase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003466CA2
Adenylosuccinate lyase {ECO:0000313|EMBL:BAJ74669.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_120_curated_131
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(128063..128623)
DNA (561bp) protein (187aa)
protocatechuate 3,4-dioxygenase beta subunit; K00448 protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3]
protocatechuate 4,5-dioxygenase subunit alpha n=1 Tax=Microbacterium sp. B19 RepID=UPI000347CD13
Protocatechuate 3,4-dioxygenase beta subunit {ECO:0000313|EMBL:BAJ74668.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_120_curated_132
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(128623..129435)
DNA (813bp) protein (271aa)
pcaH; protocatechuate 3,4-dioxygenase beta subunit; K00449 protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
protocatechuate 4,5-dioxygenase subunit beta n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B56ACD
Protocatechuate 3,4-dioxygenase beta subunit {ECO:0000313|EMBL:BAJ74667.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_120_curated_133
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

129527..130279
DNA (753bp) protein (251aa)
Transcriptional regulator n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NAL0_MICTS
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:BAJ74666.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_120_curated_134
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

130602..131780
DNA (1179bp) protein (393aa)
2-polyprenyl-6-methoxyphenol hydroxylase; K00481 p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2]
2-polyprenyl-6-methoxyphenol hydroxylase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NAK9_MICTS
2-polyprenyl-6-methoxyphenol hydroxylase {ECO:0000313|EMBL:BAJ74665.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_120_curated_135
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(131794..133290)
DNA (1497bp) protein (499aa)
L-asparagine permease n=1 Tax=Microbacterium sp. B19 RepID=UPI00034A8EF3
L-asparagine permease {ECO:0000313|EMBL:KEP76188.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
gamma-aminobutyrate permease; K11738 L-asparagine permease
scnpilot_p_inoc_scaffold_120_curated_136
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(133344..134342)
DNA (999bp) protein (333aa)
transporter n=1 Tax=Microbacterium sp. B19 RepID=UPI00034DC83A
corA; Mg2+ and Co2+ transporters; K03284 magnesium transporter
Magnesium transport protein CorA {ECO:0000256|RuleBase:RU362010}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_120_curated_137
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(134415..135284)
DNA (870bp) protein (290aa)
membrane protein n=1 Tax=Microbacterium sp. B19 RepID=UPI00034938CF
Permease {ECO:0000313|EMBL:KEP76191.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
permease, DMT superfamily; K11939 inner membrane transporter RhtA
scnpilot_p_inoc_scaffold_120_curated_138
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(135304..136572)
DNA (1269bp) protein (423aa)
beta-lactamase class C and other penicillin binding proteins; K01286 D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
beta-lactamase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003448EF4
Beta-lactamase class C and other penicillin binding proteins {ECO:0000313|EMBL:BAJ74661.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_120_curated_139
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(136744..138117)
DNA (1374bp) protein (458aa)
helicase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034571F3
ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member
ATP-dependent exoDNAse (Exonuclease V), alpha subunit-helicase superfamily I member {ECO:0000313|EMBL:BAJ74659.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_120_curated_140
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

138328..139410
DNA (1083bp) protein (361aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI000348E58B
Uncharacterized protein {ECO:0000313|EMBL:KEP76197.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
hypothetical protein
scnpilot_p_inoc_scaffold_120_curated_141
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(139450..139881)
DNA (432bp) protein (144aa)
MerR family transcriptional regulator n=1 Tax=Microbacterium sp. B19 RepID=UPI000346B892
MerR family transcriptional regulator {ECO:0000313|EMBL:KEP76195.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
transcriptional regulator
scnpilot_p_inoc_scaffold_120_curated_142
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

139933..140769
DNA (837bp) protein (279aa)
thioredoxin reductase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B56747
thioredoxin reductase
Thioredoxin reductase {ECO:0000313|EMBL:BAJ74656.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_120_curated_143
Arthrobacter sp. SPG23, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(140771..141901)
DNA (1131bp) protein (377aa)
UPI0003D69759 related cluster n=1 Tax=unknown RepID=UPI0003D69759
SPG23_c15, whole genome shotgun sequence {ECO:0000313|EMBL:KIS27880.1}; TaxID=1610703 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. SPG23.;"
esterase
scnpilot_p_inoc_scaffold_120_curated_144
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(142036..144033)
DNA (1998bp) protein (666aa)
copper transporter n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B67DFA
hypothetical protein; K02351 putative membrane protein; K07245 putative copper resistance protein D
Predicted membrane protein {ECO:0000313|EMBL:BAJ74654.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_120_curated_145
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(144111..144398)
DNA (288bp) protein (96aa)
transcriptional regulator n=1 Tax=Microbacterium sp. B19 RepID=UPI00034A97F2
hup; bacterial nucleoid DNA-binding protein; K03530 DNA-binding protein HU-beta
Integration host factor {ECO:0000313|EMBL:KEP76198.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
scnpilot_p_inoc_scaffold_120_curated_146
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(144811..145116)
DNA (306bp) protein (102aa)
30S ribosomal protein S14 n=1 Tax=Microbacterium sp. B19 RepID=UPI00034CD6FB
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
rpsN; ribosomal protein S14; K02954 small subunit ribosomal protein S14
scnpilot_p_inoc_scaffold_120_curated_147
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(145121..145291)
DNA (171bp) protein (57aa)
50S ribosomal protein L33 n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NAJ4_MICTS
rpmG; ribosomal protein L33; K02913 large subunit ribosomal protein L33
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
scnpilot_p_inoc_scaffold_120_curated_148
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(145291..145527)
DNA (237bp) protein (79aa)
50S ribosomal protein L28 n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NAJ3_MICTS
rpmB; ribosomal protein L28; K02902 large subunit ribosomal protein L28
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_120_curated_149
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(145667..146365)
DNA (699bp) protein (233aa)
3-methyladenine DNA glycosylase; K03652 DNA-3-methyladenine glycosylase [EC:3.2.2.21]
Putative 3-methyladenine DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097343}; EC=3.2.2.- {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097340};; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
3-methyladenine DNA glycosylase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034DCBF3
scnpilot_p_inoc_scaffold_120_curated_150
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(146362..147768)
DNA (1407bp) protein (469aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI0003493601
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ74647.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
Displaying items 121-150 of 471 in total

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