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scnpilot_p_inoc_scaffold_120_curated_145

Organism: scnpilot_dereplicated_Microbacterium_4

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(144111..144398)

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Microbacterium sp. B19 RepID=UPI00034A97F2 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 95.0
  • Bit_score: 178
  • Evalue 3.30e-42
hup; bacterial nucleoid DNA-binding protein; K03530 DNA-binding protein HU-beta similarity KEGG
DB: KEGG
  • Identity: 98.9
  • Coverage: 95.0
  • Bit_score: 176
  • Evalue 3.00e-42
Integration host factor {ECO:0000313|EMBL:KEP76198.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.9
  • Coverage: 95.0
  • Bit_score: 176
  • Evalue 1.30e-41

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Taxonomy

Microbacterium sp. SUBG005 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 288
ATGGCCGACAAGTCCATCACCAAGACCGAGCTCGTCGCGAGCATCGCCAGCGCGACCGGACAGAGCCAGTCCGCCGTGTCGAGCGTGCTCGACTCCCTCTTCTCCACCGTCTCCGAGGCGGTCGCCAAGGGCAGCAAGGTCTCGATCCCCGGCTGGATCGCGTTCGAGCAGGTCGCCACGTCGGCCCGCACCGGCCGCAACCCCCAGACGGGCGAGGAGATCTCGATCCCCGCGGGCAAGCGCGTCAAGGTCACCGCCGGCTCGAAGCTGAAGGCTGCCGTCAAGTAA
PROTEIN sequence
Length: 96
MADKSITKTELVASIASATGQSQSAVSSVLDSLFSTVSEAVAKGSKVSIPGWIAFEQVATSARTGRNPQTGEEISIPAGKRVKVTAGSKLKAAVK*