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scnpilot_p_inoc_scaffold_342_curated

Search features with annotation key words

Displaying items 1-30 of 96 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_342_curated_1
Rathayibacter toxicus, Rathayibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..584)
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI000345E8AA
Strain 70137, complete genome {ECO:0000313|EMBL:AJM78191.1}; TaxID=145458 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Rathayibacter.;" source="Rathayibacter toxicus.;"
Ni,Fe-hydrogenase III small subunit
scnpilot_p_inoc_scaffold_342_curated_2
unknown

Not on your lists

840..1439
DNA (600bp) protein (200aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_342_curated_3
unknown

Not on your lists

comp(1327..1734)
DNA (408bp) protein (136aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_342_curated_4
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1820..2833
DNA (1014bp) protein (338aa)
LacI family transcriptional regulator n=1 Tax=Microbacterium sp. B19 RepID=UPI000348152F
LacI family transcriptional regulator {ECO:0000313|EMBL:KEP74996.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
transcriptional regulator
scnpilot_p_inoc_scaffold_342_curated_5
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2945..3532
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B531C6
Uncharacterized protein {ECO:0000313|EMBL:KEP74997.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
DnaJ-class molecular chaperone
scnpilot_p_inoc_scaffold_342_curated_6
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3544..4875)
DNA (1332bp) protein (444aa)
sodium:proton antiporter, partial n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B7667D
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
nhaA; Na+/H+ antiporter; K03313 Na+:H+ antiporter, NhaA family
scnpilot_p_inoc_scaffold_342_curated_7
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5137..6474)
DNA (1338bp) protein (446aa)
Xanthine/uracil permease n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N6L8_MICTS
ycdG; xanthine/uracil permease
Xanthine/uracil permease {ECO:0000313|EMBL:BAJ74166.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_342_curated_8
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6631..7620)
DNA (990bp) protein (330aa)
purC; phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase; K01923 phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N6L7_MICTS
scnpilot_p_inoc_scaffold_342_curated_9
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7680..9377
DNA (1698bp) protein (566aa)
Choline-glycine betaine transporter n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N6L6_MICTS
choline-glycine betaine transporter; K02168 high-affinity choline transport protein
Choline-glycine betaine transporter {ECO:0000313|EMBL:BAJ74164.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_342_curated_10
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9563..10186
DNA (624bp) protein (208aa)
Predicted transcriptional regulator n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N6L5_MICTS
Transcriptional regulator {ECO:0000313|EMBL:KEP74999.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
transcriptional regulator
scnpilot_p_inoc_scaffold_342_curated_11
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10183..11814
DNA (1632bp) protein (544aa)
Permease of the major facilitator superfamily n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N6L4_MICTS
permease of the major facilitator superfamily
Permease of the major facilitator superfamily {ECO:0000313|EMBL:BAJ74162.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_342_curated_12
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11862..12200)
DNA (339bp) protein (113aa)
RNA methyltransferase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B6519C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ74150.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_342_curated_13
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12257..13528)
DNA (1272bp) protein (424aa)
purD; phosphoribosylamine-glycine ligase; K01945 phosphoribosylamine--glycine ligase [EC:6.3.4.13]
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
phosphoribosylamine--glycine ligase n=1 Tax=Microbacterium sp. B19 RepID=UPI000345420C
scnpilot_p_inoc_scaffold_342_curated_14
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13686..14042
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B6BE99
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ74148.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_342_curated_15
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14135..14470
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI00034C8FEC
trk-type K+ transport systems, membrane components
Trk-type K+ transport systems, membrane components {ECO:0000313|EMBL:BAJ74147.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_342_curated_16
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14481..15092)
DNA (612bp) protein (204aa)
Zn-dependent alcohol dehydrogenase n=1 Tax=Microbacterium sp. B19 RepID=UPI000348F318
Zinc-dependent alcohol dehydrogenase {ECO:0000313|EMBL:KEP74401.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
Zn-dependent alcohol dehydrogenase
scnpilot_p_inoc_scaffold_342_curated_17
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15699..16175
DNA (477bp) protein (159aa)
DNA helicase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B597EF
Uncharacterized protein {ECO:0000313|EMBL:KJQ53476.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
superfamily I DNA and RNA helicase and helicase subunits
scnpilot_p_inoc_scaffold_342_curated_18
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16330..17472
DNA (1143bp) protein (381aa)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synthase {ECO:0000256|HAMAP-Rule:MF_00741}; AIRS {ECO:0000256|HAMAP-Rule:MF_00741}; Phosphoribosyl-aminoimidazole synthetase {ECO:0000256|HAMAP-Rule:MF_00741}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
purM; phosphoribosylaminoimidazole (AIR) synthetase; K01933 phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N6J5_MICTS
scnpilot_p_inoc_scaffold_342_curated_19
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17479..18945
DNA (1467bp) protein (489aa)
purF; glutamine phosphoribosylpyrophosphate amidotransferase; K00764 amidophosphoribosyltransferase [EC:2.4.2.14]
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (st
amidophosphoribosyltransferase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034A5450
scnpilot_p_inoc_scaffold_342_curated_20
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18969..20159
DNA (1191bp) protein (397aa)
cyanate permease n=1 Tax=Microbacterium sp. B19 RepID=UPI000347308C
ABC transporter permease {ECO:0000313|EMBL:KEP74399.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
cyanate permease; K03449 MFS transporter, CP family, cyanate transporter
scnpilot_p_inoc_scaffold_342_curated_21
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20166..20348)
DNA (183bp) protein (61aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI00034AF587
Uncharacterized protein {ECO:0000313|EMBL:KEP74394.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
hypothetical protein
scnpilot_p_inoc_scaffold_342_curated_22
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20511..21026
DNA (516bp) protein (172aa)
universal stress protein UspA n=1 Tax=Microbacterium sp. B19 RepID=UPI000345D189
Universal stress protein UspA {ECO:0000313|EMBL:KEP74393.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
universal stress protein UspA
scnpilot_p_inoc_scaffold_342_curated_23
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21030..21635)
DNA (606bp) protein (202aa)
transcriptional regulator n=1 Tax=Microbacterium sp. B19 RepID=UPI00034D1251
transcriptional regulator
Predicted transcriptional regulator {ECO:0000313|EMBL:BAJ74138.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_342_curated_24
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21635..22480)
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI00034DDD2D
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:BAJ74137.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_342_curated_25
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22807..22971)
DNA (165bp) protein (55aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI000345F60F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ74136.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_342_curated_26
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23191..23460
DNA (270bp) protein (90aa)
Plasmid stabilization system protein n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N6I7_MICTS
Rho termination factor {ECO:0000313|EMBL:KEP74451.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
plasmid stabilization system protein
scnpilot_p_inoc_scaffold_342_curated_27
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23463..24428
DNA (966bp) protein (322aa)
topoisomerase I n=1 Tax=Microbacterium sp. B19 RepID=UPI000348F2AD
Topoisomerase I {ECO:0000313|EMBL:KEP74450.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
topoisomerase IB
scnpilot_p_inoc_scaffold_342_curated_28
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24430..24708)
DNA (279bp) protein (93aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8ND54_MICTS
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:BAJ73693.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_342_curated_29
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24705..26381)
DNA (1677bp) protein (559aa)
putative NADH oxidase; K00359 NADH oxidase [EC:1.6.-.-]
Putative NADH oxidase {ECO:0000313|EMBL:CAN00097.1}; EC=1.6.-.- {ECO:0000313|EMBL:CAN00097.1};; TaxID=443906 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382).;"
Putative NADH oxidase n=1 Tax=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) RepID=A5CM13_CLAM3
scnpilot_p_inoc_scaffold_342_curated_30
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26378..26539)
DNA (162bp) protein (54aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E7G5_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ53001.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein
Displaying items 1-30 of 96 in total

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