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scnpilot_p_inoc_scaffold_111_curated_188

Organism: scnpilot_dereplicated_Microbacterium_4

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 222570..223232

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NBL4_MICTS similarity UNIREF
DB: UNIREF100
  • Identity: 88.2
  • Coverage: 228.0
  • Bit_score: 387
  • Evalue 8.20e-105
sigH; DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 88.2
  • Coverage: 228.0
  • Bit_score: 387
  • Evalue 2.60e-105
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog {ECO:0000313|EMBL:BAJ73474.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.2
  • Coverage: 228.0
  • Bit_score: 387
  • Evalue 1.10e-104

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Taxonomy

Microbacterium testaceum → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 663
GTGACCGCACTTCTCCAGCGCCCGGCGCTGCGATGGCCCGAACATACGCTCGACGTAGACTTGCCACCGATGGATGACACGGCAGATGCGACGGAGCCTCGCGCGCAGTTCGAAGAGCAGGCTCTGCCCTTCATGGACCAGCTCTATGCGGCGGCCATGCGCATGACGCGCAACCCGGCCGACGCGGCCGACCTCGTGCAGGAGACCTTCGTCAAGGCCTTCGGATCGTGGTCGACCTTCACGCAGGGCACGAACCTGAAGGCCTGGCTCTACCGCATCCTGACGAACACGTACATCAACACGTACCGCAAGAAGCAGCGCGAGCCGTACCAGAGCGCCATCGACGACCTCGAGGACTGGCAGCTCGGCGGCGCCGAGTCGACCACGGCCACGAGCGCCCGCTCGGCCGAGGCCGAAGCGATCGACCACATGCCCGCGTCCGTCGTCAAGGACGCGCTGCAGTCGATCCCCGAGGATTTCCGGATGGCGGTGTACCTCGCCGACGTCGAGGGCTTCGCCTACCAGGAGATCGCCGACATCATGAAGACACCGATCGGCACGGTCATGAGCCGTCTGCACCGCGGCAGGCGGCTGCTGCGTGACCTGCTGTCGGACTACGCGAAGGAGCGCGGCATCCAGGCCGCGACGGGAGTGAAGAAATGA
PROTEIN sequence
Length: 221
VTALLQRPALRWPEHTLDVDLPPMDDTADATEPRAQFEEQALPFMDQLYAAAMRMTRNPADAADLVQETFVKAFGSWSTFTQGTNLKAWLYRILTNTYINTYRKKQREPYQSAIDDLEDWQLGGAESTTATSARSAEAEAIDHMPASVVKDALQSIPEDFRMAVYLADVEGFAYQEIADIMKTPIGTVMSRLHRGRRLLRDLLSDYAKERGIQAATGVKK*