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scnpilot_p_inoc_scaffold_111_curated_256

Organism: scnpilot_dereplicated_Microbacterium_4

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 290894..292963

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.8
  • Coverage: 731.0
  • Bit_score: 922
  • Evalue 3.10e-265
Transcription termination factor Rho n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NAW8_MICTS similarity UNIREF
DB: UNIREF100
  • Identity: 72.8
  • Coverage: 731.0
  • Bit_score: 922
  • Evalue 2.20e-265
rho; transcription termination factor; K03628 transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 72.8
  • Coverage: 731.0
  • Bit_score: 922
  • Evalue 6.90e-266

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Taxonomy

Microbacterium testaceum → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2070
GTGGAGTCCATCTCCGAGACCCAGCCCGTCGACGCGCCCGAGGGCGCGGACATCACCCCCGAGGAGCAGTCCGCCGCTCCCGCCGACGAGACGCTGTTCGACACGCCCGCCGACACGGAGGGCGAGGAAGCCCCCGCCGACCCCGCCCCCGAGGCGGAGCCCGCGGCGGAGGAGCCCGCCCCGGTCGCTGACGAGGCATCGGTCGATGCCCCGGCTGAGGCCGCGGCCGAGGAGTCGGCGCCCGCGGACGAGCCGGCGCCCGCCGTCGAGCCGGCCGCCGAAGAGGCCGCCGCCGCACCGGCCGAGGAGCCGGCCGCCGAAGAGGCGCCCGCCAAGCCCGCTCGCGCCCCCCGCAAGCGCGCCCCGCGTCGGGCGAAGAGCGCCCCCGCCGACGAGACGCCGGCCGAGGAGGCAGCGGCACCCGCCGAGGTCGCCGCGCCCGAGGCGGCCGTGGACGCCGCGCCCGAGGCGTCGGCCGAGCCCGCCGCGGCCCCCGCCGACGAGACCCCCGCCGTCGCGGCTGAGACCCCCGAGGCCGGCGCGGACGCGCCCGCCGTGGACGCGGCCGAGCCGAAGACCGAGACCGCCGAGGGCGAGGCGAGCGCCGAGGCCGTGGCATCCGCCCCCGACGGCGAGTCGAGCGAGGAGTCCACCGAGACGCCGTCGCGCAGCCGTAGCCGGAGCCGATCGCGCAACCGCAACCGCAACAAGGCCGAGAACGCCGACGGCGCCGCTCCCGCGGCGAACACGCCGGCCGCCGCCGAAGAGGCCGAGGCGCCCGCGGAGAACGGCTCGCAGGCCCCGCAGCAGAACCAGGCGAACAGCCGCAACCGCCAGCGCAACAAGCGCCGCGGCCAGGGCACCACGGGCGATGAGTTCGAGGGCGAGATCGGCGAAGACGACGTCCTGATCCCGATCGCGGGCATCCTCGACGTCCTCGACAACTACGCGTTCGTCCGTACGACGGGCTACCTGCCCGGCCCGAGCGACGTGTACGTGTCGCTCGGCCAGGTGAAGAAGTACAACCTGCGCAAGGGTGACGCCGTCGTCGGCTCGATCAAGCAGCCGCGTGAGAACGAGCAGTCCAGCCGCCAGAAGTACAACGCCCTGGTCAAGGTCGACTCCATCAACGGCCTTTCCGTCGACGACGCCGCCGGTCGCGTCGAGTTCGGCAAGCTCACCCCGCTGTACCCGCAGGAGCGCCTGCGCATGGAGACGGCGCCCGAGAAGCTCACGCAGCGTCTCATCGACCTGGTCGCCCCGGTCGGCAAGGGCCAGCGCGGTCTGATCGTGGCGCCCCCGAAGGCGGGCAAGACGATCGTGCTGCAGCAGATCGCGAACGCGATCGCGCACAACAACCCCGAGGTCCACCTCATGGTCGTGCTCGTCGACGAGCGCCCCGAAGAGGTCACCGACATGCAGCGCACGGTCAAGGGCGAGGTCATCGCCTCGACCTTCGACCGTCCCGCCGAAGACCACACCACGGTCGCCGAGCTCGCCATCGAGCGTGCCAAGCGTCTCGTCGAGCTCGGTCGCGACGTGGTCGTGCTGCTCGACTCGATCACGCGCCTCGGCCGTGCGTACAACCTGTCGGCACCCACGTCCGGCCGCGTGCTCACCGGTGGGGTCGACGCATCGGCGCTGTACCCGCCCAAGCGCTTCTTCGGCGCCGCGCGCAACATCGAGAACGGTGGATCGCTCACGATCCTGGCGACCGCGCTGGTCGAGACCGGCTCGAAGATGGACGACGTGATCTTCGAGGAGTTCAAGGGCACCGGCAACAGCGAGTTGCGCCTGAGCCGTCAGCTCGCCGACAAGCGGATCTTCCCCGCGGTCGACGTCAACGCGTCCTCGACCCGTCGCGAAGAGATGCTGCTCTCGCCCGACGAGGTCAAGATCACCTGGAAGCTGCGTCGTGCCCTCGCGGGCCTCGACCCGCAGCAGGCCCTCGAGGTCGTGCTCGGCAAGCTCAAGGAGACGCAGTCCAACGTCGAGTTCCTCGTCCAGATGCAGAAGTCGATCCCGGCTCCCGCGCGCGGAGACAACGGGCACGACAACGGCATCCGCTGA
PROTEIN sequence
Length: 690
VESISETQPVDAPEGADITPEEQSAAPADETLFDTPADTEGEEAPADPAPEAEPAAEEPAPVADEASVDAPAEAAAEESAPADEPAPAVEPAAEEAAAAPAEEPAAEEAPAKPARAPRKRAPRRAKSAPADETPAEEAAAPAEVAAPEAAVDAAPEASAEPAAAPADETPAVAAETPEAGADAPAVDAAEPKTETAEGEASAEAVASAPDGESSEESTETPSRSRSRSRSRNRNRNKAENADGAAPAANTPAAAEEAEAPAENGSQAPQQNQANSRNRQRNKRRGQGTTGDEFEGEIGEDDVLIPIAGILDVLDNYAFVRTTGYLPGPSDVYVSLGQVKKYNLRKGDAVVGSIKQPRENEQSSRQKYNALVKVDSINGLSVDDAAGRVEFGKLTPLYPQERLRMETAPEKLTQRLIDLVAPVGKGQRGLIVAPPKAGKTIVLQQIANAIAHNNPEVHLMVVLVDERPEEVTDMQRTVKGEVIASTFDRPAEDHTTVAELAIERAKRLVELGRDVVVLLDSITRLGRAYNLSAPTSGRVLTGGVDASALYPPKRFFGAARNIENGGSLTILATALVETGSKMDDVIFEEFKGTGNSELRLSRQLADKRIFPAVDVNASSTRREEMLLSPDEVKITWKLRRALAGLDPQQALEVVLGKLKETQSNVEFLVQMQKSIPAPARGDNGHDNGIR*