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scnpilot_p_inoc_scaffold_0_curated_406

Organism: scnpilot_dereplicated_Microbacterium_4

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(435251..435898)

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimM n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NDF8_MICTS similarity UNIREF
DB: UNIREF100
  • Identity: 82.3
  • Coverage: 215.0
  • Bit_score: 365
  • Evalue 4.20e-98
rimM; RimM protein; K02860 16S rRNA processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 82.3
  • Coverage: 215.0
  • Bit_score: 365
  • Evalue 1.30e-98
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.3
  • Coverage: 215.0
  • Bit_score: 365
  • Evalue 5.90e-98

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Taxonomy

Microbacterium testaceum → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 648
ATGTCGGCCGGCGACACCGCGGGCGCCCAGCCCGCCAAGACCCAGCTCCGTGTGGGCCGCCTGGTCAAGGCCCACGGGCTGAAGGGCGCATTCAAGCTCGAGCTCTACACGGATGACCCCGAGGGACGTTTCGTCGCCGGGAACAGCTTCACCCTGCAGGTGCCGGAATCCTCGCCGTGGCACGGCCGCGAGCTGACGGTCCGCGAATTCCGCTGGATGAACTCCCACCCGGTCGCCTTCTTCGAAGGCGTCGACGACCGTACGGCCGCAGAGGGCCTGGTCAAGGCGATCCTGTGGATCGACCAGGACGCCGAGACCGCCCCCGCCGAAGACGACGCCTGGTACGACCACCAGCTCATCGGCCTCGATGTGGTGCGCGACGGTGAGGTCATCGGGCGCGTCGTGCGCGTCGATCACTTCCCCGCGCAGGACCTGCTGATCGTGCGTCCGACGGGTCGCGGCGAAGACGCCGACGTCCTGGTCCCCTTCGTGAGCGCGATCGTGCCCGAGGTCGACGTCGAGGCCGGTCGGGTCGTGGTGACTCCTCCCGCCGGTCTCTTCGAGGAACTCCCGGGCGACGACGACACCCCGCAGGACGAGTCCGGTGCGGACGAGTCCGACGAGGTCGCCGACTCCCGCGAGGACTGA
PROTEIN sequence
Length: 216
MSAGDTAGAQPAKTQLRVGRLVKAHGLKGAFKLELYTDDPEGRFVAGNSFTLQVPESSPWHGRELTVREFRWMNSHPVAFFEGVDDRTAAEGLVKAILWIDQDAETAPAEDDAWYDHQLIGLDVVRDGEVIGRVVRVDHFPAQDLLIVRPTGRGEDADVLVPFVSAIVPEVDVEAGRVVVTPPAGLFEELPGDDDTPQDESGADESDEVADSRED*